Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.13■□□□□ 0.49
SDHAF3Q9NRP4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.13■□□□□ 0.49
SDHAF3Q9NRP4 AL391422.3-201ENST00000603791 2761 ntBASIC18.13■□□□□ 0.49
SDHAF3Q9NRP4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SDHAF3Q9NRP4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.13■□□□□ 0.49
SDHAF3Q9NRP4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
SDHAF3Q9NRP4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.12■□□□□ 0.49
SDHAF3Q9NRP4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SDHAF3Q9NRP4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SDHAF3Q9NRP4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SDHAF3Q9NRP4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SDHAF3Q9NRP4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.12■□□□□ 0.49
SDHAF3Q9NRP4 TSPY20P-201ENST00000450910 630 ntBASIC18.12■□□□□ 0.49
SDHAF3Q9NRP4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.12■□□□□ 0.49
SDHAF3Q9NRP4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.12■□□□□ 0.49
SDHAF3Q9NRP4 AC006058.3-201ENST00000606217 1069 ntBASIC18.12■□□□□ 0.49
SDHAF3Q9NRP4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SDHAF3Q9NRP4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SDHAF3Q9NRP4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SDHAF3Q9NRP4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SDHAF3Q9NRP4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.12■□□□□ 0.49
SDHAF3Q9NRP4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SDHAF3Q9NRP4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.12■□□□□ 0.49
SDHAF3Q9NRP4 AP001271.2-201ENST00000624018 1556 ntBASIC18.12■□□□□ 0.49
SDHAF3Q9NRP4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SDHAF3Q9NRP4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SDHAF3Q9NRP4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SDHAF3Q9NRP4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SDHAF3Q9NRP4 AC099778.1-201ENST00000568593 1911 ntBASIC18.11■□□□□ 0.49
SDHAF3Q9NRP4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SDHAF3Q9NRP4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SDHAF3Q9NRP4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.11■□□□□ 0.49
SDHAF3Q9NRP4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SDHAF3Q9NRP4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
SDHAF3Q9NRP4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SDHAF3Q9NRP4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.11■□□□□ 0.49
SDHAF3Q9NRP4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.11■□□□□ 0.49
SDHAF3Q9NRP4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SDHAF3Q9NRP4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.11■□□□□ 0.49
SDHAF3Q9NRP4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SDHAF3Q9NRP4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.11■□□□□ 0.49
SDHAF3Q9NRP4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SDHAF3Q9NRP4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SDHAF3Q9NRP4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SDHAF3Q9NRP4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.11■□□□□ 0.49
SDHAF3Q9NRP4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SDHAF3Q9NRP4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
SDHAF3Q9NRP4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SDHAF3Q9NRP4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.11■□□□□ 0.49
SDHAF3Q9NRP4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
SDHAF3Q9NRP4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SDHAF3Q9NRP4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.11■□□□□ 0.49
SDHAF3Q9NRP4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
SDHAF3Q9NRP4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SDHAF3Q9NRP4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
SDHAF3Q9NRP4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
SDHAF3Q9NRP4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.1■□□□□ 0.49
SDHAF3Q9NRP4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.1■□□□□ 0.49
SDHAF3Q9NRP4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SDHAF3Q9NRP4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SDHAF3Q9NRP4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SDHAF3Q9NRP4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.1■□□□□ 0.49
SDHAF3Q9NRP4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
SDHAF3Q9NRP4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SDHAF3Q9NRP4 KRT18P29-201ENST00000397031 1267 ntBASIC18.1■□□□□ 0.49
SDHAF3Q9NRP4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SDHAF3Q9NRP4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SDHAF3Q9NRP4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.1■□□□□ 0.49
SDHAF3Q9NRP4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SDHAF3Q9NRP4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.1■□□□□ 0.49
SDHAF3Q9NRP4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SDHAF3Q9NRP4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.1■□□□□ 0.49
SDHAF3Q9NRP4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SDHAF3Q9NRP4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SDHAF3Q9NRP4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SDHAF3Q9NRP4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SDHAF3Q9NRP4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SDHAF3Q9NRP4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SDHAF3Q9NRP4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SDHAF3Q9NRP4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SDHAF3Q9NRP4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SDHAF3Q9NRP4 AC116351.2-201ENST00000606540 1585 ntBASIC18.09■□□□□ 0.49
SDHAF3Q9NRP4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.09■□□□□ 0.49
SDHAF3Q9NRP4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.09■□□□□ 0.49
SDHAF3Q9NRP4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SDHAF3Q9NRP4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SDHAF3Q9NRP4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SDHAF3Q9NRP4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SDHAF3Q9NRP4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SDHAF3Q9NRP4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.09■□□□□ 0.49
SDHAF3Q9NRP4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.09■□□□□ 0.49
SDHAF3Q9NRP4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SDHAF3Q9NRP4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SDHAF3Q9NRP4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
SDHAF3Q9NRP4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.09■□□□□ 0.49
SDHAF3Q9NRP4 AC069544.1-201ENST00000609399 999 ntBASIC18.09■□□□□ 0.49
SDHAF3Q9NRP4 ITM2C-210ENST00000620962 501 ntBASIC18.09■□□□□ 0.49
SDHAF3Q9NRP4 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SDHAF3Q9NRP4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SDHAF3Q9NRP4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms