Protein–RNA interactions for Protein: Q9NR23

GDF3, Growth/differentiation factor 3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3Q9NR23 RNA5SP413-201ENST00000516373 109 ntBASIC20.82■□□□□ 0.92
GDF3Q9NR23 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.82■□□□□ 0.92
GDF3Q9NR23 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.82■□□□□ 0.92
GDF3Q9NR23 AC092118.2-201ENST00000613495 667 ntBASIC20.82■□□□□ 0.92
GDF3Q9NR23 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.82■□□□□ 0.92
GDF3Q9NR23 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.82■□□□□ 0.92
GDF3Q9NR23 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GDF3Q9NR23 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GDF3Q9NR23 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GDF3Q9NR23 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
GDF3Q9NR23 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GDF3Q9NR23 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.82■□□□□ 0.92
GDF3Q9NR23 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.82■□□□□ 0.92
GDF3Q9NR23 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GDF3Q9NR23 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
GDF3Q9NR23 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.81■□□□□ 0.92
GDF3Q9NR23 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
GDF3Q9NR23 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GDF3Q9NR23 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
GDF3Q9NR23 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GDF3Q9NR23 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GDF3Q9NR23 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.81■□□□□ 0.92
GDF3Q9NR23 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GDF3Q9NR23 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
GDF3Q9NR23 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
GDF3Q9NR23 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.81■□□□□ 0.92
GDF3Q9NR23 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GDF3Q9NR23 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.81■□□□□ 0.92
GDF3Q9NR23 AC093787.1-201ENST00000450396 207 ntBASIC20.81■□□□□ 0.92
GDF3Q9NR23 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GDF3Q9NR23 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.81■□□□□ 0.92
GDF3Q9NR23 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
GDF3Q9NR23 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GDF3Q9NR23 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.81■□□□□ 0.92
GDF3Q9NR23 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GDF3Q9NR23 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GDF3Q9NR23 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GDF3Q9NR23 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.8■□□□□ 0.92
GDF3Q9NR23 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.8■□□□□ 0.92
GDF3Q9NR23 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
GDF3Q9NR23 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GDF3Q9NR23 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.8■□□□□ 0.92
GDF3Q9NR23 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
GDF3Q9NR23 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.8■□□□□ 0.92
GDF3Q9NR23 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.8■□□□□ 0.92
GDF3Q9NR23 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
GDF3Q9NR23 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.8■□□□□ 0.92
GDF3Q9NR23 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.8■□□□□ 0.92
GDF3Q9NR23 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GDF3Q9NR23 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.79■□□□□ 0.92
GDF3Q9NR23 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GDF3Q9NR23 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
GDF3Q9NR23 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
GDF3Q9NR23 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
GDF3Q9NR23 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GDF3Q9NR23 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GDF3Q9NR23 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.79■□□□□ 0.92
GDF3Q9NR23 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
GDF3Q9NR23 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.79■□□□□ 0.92
GDF3Q9NR23 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.79■□□□□ 0.92
GDF3Q9NR23 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.79■□□□□ 0.92
GDF3Q9NR23 POU5F1P3-201ENST00000428824 1078 ntBASIC20.79■□□□□ 0.92
GDF3Q9NR23 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GDF3Q9NR23 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
GDF3Q9NR23 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GDF3Q9NR23 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GDF3Q9NR23 NEFHP1-201ENST00000412845 2629 ntBASIC20.79■□□□□ 0.92
GDF3Q9NR23 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
GDF3Q9NR23 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.79■□□□□ 0.92
GDF3Q9NR23 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
GDF3Q9NR23 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
GDF3Q9NR23 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GDF3Q9NR23 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.79■□□□□ 0.92
GDF3Q9NR23 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GDF3Q9NR23 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.78■□□□□ 0.92
GDF3Q9NR23 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GDF3Q9NR23 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
GDF3Q9NR23 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.78■□□□□ 0.92
GDF3Q9NR23 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.78■□□□□ 0.92
GDF3Q9NR23 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GDF3Q9NR23 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
GDF3Q9NR23 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GDF3Q9NR23 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
GDF3Q9NR23 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
GDF3Q9NR23 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.78■□□□□ 0.92
GDF3Q9NR23 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GDF3Q9NR23 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GDF3Q9NR23 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
GDF3Q9NR23 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
GDF3Q9NR23 BX276092.2-201ENST00000417668 665 ntBASIC20.78■□□□□ 0.92
GDF3Q9NR23 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.78■□□□□ 0.92
GDF3Q9NR23 AL162412.1-201ENST00000567129 965 ntBASIC20.78■□□□□ 0.92
GDF3Q9NR23 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
GDF3Q9NR23 AL591742.1-201ENST00000604433 565 ntBASIC20.78■□□□□ 0.92
GDF3Q9NR23 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GDF3Q9NR23 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GDF3Q9NR23 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GDF3Q9NR23 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.78■□□□□ 0.92
GDF3Q9NR23 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
GDF3Q9NR23 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms