Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.82■■□□□ 1.08
UBE2OQ9C0C9 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
UBE2OQ9C0C9 COX11P1-201ENST00000489116 835 ntBASIC21.82■■□□□ 1.08
UBE2OQ9C0C9 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.82■■□□□ 1.08
UBE2OQ9C0C9 AC026271.3-201ENST00000571884 352 ntBASIC21.82■■□□□ 1.08
UBE2OQ9C0C9 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.82■■□□□ 1.08
UBE2OQ9C0C9 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.82■■□□□ 1.08
UBE2OQ9C0C9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UBE2OQ9C0C9 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UBE2OQ9C0C9 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
UBE2OQ9C0C9 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
UBE2OQ9C0C9 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
UBE2OQ9C0C9 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
UBE2OQ9C0C9 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
UBE2OQ9C0C9 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
UBE2OQ9C0C9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
UBE2OQ9C0C9 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21.81■■□□□ 1.08
UBE2OQ9C0C9 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
UBE2OQ9C0C9 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
UBE2OQ9C0C9 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.81■■□□□ 1.08
UBE2OQ9C0C9 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
UBE2OQ9C0C9 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
UBE2OQ9C0C9 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
UBE2OQ9C0C9 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
UBE2OQ9C0C9 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
UBE2OQ9C0C9 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
UBE2OQ9C0C9 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
UBE2OQ9C0C9 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.81■■□□□ 1.08
UBE2OQ9C0C9 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
UBE2OQ9C0C9 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
UBE2OQ9C0C9 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.8■■□□□ 1.08
UBE2OQ9C0C9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
UBE2OQ9C0C9 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.8■■□□□ 1.08
UBE2OQ9C0C9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBE2OQ9C0C9 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBE2OQ9C0C9 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.8■■□□□ 1.08
UBE2OQ9C0C9 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
UBE2OQ9C0C9 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.8■■□□□ 1.08
UBE2OQ9C0C9 B3GAT3P1-201ENST00000471720 806 ntBASIC21.8■■□□□ 1.08
UBE2OQ9C0C9 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.8■■□□□ 1.08
UBE2OQ9C0C9 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC21.8■■□□□ 1.08
UBE2OQ9C0C9 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.8■■□□□ 1.08
UBE2OQ9C0C9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.8■■□□□ 1.08
UBE2OQ9C0C9 GPALPP1-207ENST00000611650 899 ntBASIC21.8■■□□□ 1.08
UBE2OQ9C0C9 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBE2OQ9C0C9 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
UBE2OQ9C0C9 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBE2OQ9C0C9 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.8■■□□□ 1.08
UBE2OQ9C0C9 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.79■■□□□ 1.08
UBE2OQ9C0C9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.79■■□□□ 1.08
UBE2OQ9C0C9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
UBE2OQ9C0C9 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
UBE2OQ9C0C9 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.79■■□□□ 1.08
UBE2OQ9C0C9 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
UBE2OQ9C0C9 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.79■■□□□ 1.08
UBE2OQ9C0C9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.79■■□□□ 1.08
UBE2OQ9C0C9 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBE2OQ9C0C9 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
UBE2OQ9C0C9 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.78■■□□□ 1.08
UBE2OQ9C0C9 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.78■■□□□ 1.08
UBE2OQ9C0C9 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
UBE2OQ9C0C9 AC069148.1-201ENST00000608741 768 ntBASIC21.78■■□□□ 1.08
UBE2OQ9C0C9 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.78■■□□□ 1.08
UBE2OQ9C0C9 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.78■■□□□ 1.08
UBE2OQ9C0C9 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.78■■□□□ 1.08
UBE2OQ9C0C9 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBE2OQ9C0C9 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
UBE2OQ9C0C9 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
UBE2OQ9C0C9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBE2OQ9C0C9 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
UBE2OQ9C0C9 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
UBE2OQ9C0C9 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
UBE2OQ9C0C9 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
UBE2OQ9C0C9 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.77■■□□□ 1.08
UBE2OQ9C0C9 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
UBE2OQ9C0C9 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
UBE2OQ9C0C9 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.77■■□□□ 1.08
UBE2OQ9C0C9 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
UBE2OQ9C0C9 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.77■■□□□ 1.08
UBE2OQ9C0C9 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.77■■□□□ 1.08
UBE2OQ9C0C9 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.77■■□□□ 1.08
UBE2OQ9C0C9 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
UBE2OQ9C0C9 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.77■■□□□ 1.08
UBE2OQ9C0C9 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
UBE2OQ9C0C9 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.77■■□□□ 1.08
UBE2OQ9C0C9 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.77■■□□□ 1.08
UBE2OQ9C0C9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
UBE2OQ9C0C9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
UBE2OQ9C0C9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
UBE2OQ9C0C9 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
UBE2OQ9C0C9 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
UBE2OQ9C0C9 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
UBE2OQ9C0C9 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
UBE2OQ9C0C9 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.76■■□□□ 1.07
UBE2OQ9C0C9 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UBE2OQ9C0C9 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
UBE2OQ9C0C9 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.76■■□□□ 1.07
UBE2OQ9C0C9 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
UBE2OQ9C0C9 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UBE2OQ9C0C9 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms