Protein–RNA interactions for Protein: Q9BXL8

CDCA4, Cell division cycle-associated protein 4, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4Q9BXL8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.71■□□□□ 0.43
CDCA4Q9BXL8 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDCA4Q9BXL8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.71■□□□□ 0.43
CDCA4Q9BXL8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
CDCA4Q9BXL8 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.71■□□□□ 0.43
CDCA4Q9BXL8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDCA4Q9BXL8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CDCA4Q9BXL8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.71■□□□□ 0.43
CDCA4Q9BXL8 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.71■□□□□ 0.43
CDCA4Q9BXL8 AC135050.7-201ENST00000624508 2218 ntBASIC17.71■□□□□ 0.43
CDCA4Q9BXL8 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDCA4Q9BXL8 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDCA4Q9BXL8 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CDCA4Q9BXL8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.71■□□□□ 0.42
CDCA4Q9BXL8 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.71■□□□□ 0.42
CDCA4Q9BXL8 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CDCA4Q9BXL8 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDCA4Q9BXL8 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDCA4Q9BXL8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDCA4Q9BXL8 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.7■□□□□ 0.42
CDCA4Q9BXL8 PTBP1P-201ENST00000554374 1601 ntBASIC17.7■□□□□ 0.42
CDCA4Q9BXL8 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CDCA4Q9BXL8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.7■□□□□ 0.42
CDCA4Q9BXL8 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CDCA4Q9BXL8 IRS3P-201ENST00000223076 1006 ntBASIC17.7■□□□□ 0.42
CDCA4Q9BXL8 PGM5P4-201ENST00000421970 445 ntBASIC17.7■□□□□ 0.42
CDCA4Q9BXL8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.7■□□□□ 0.42
CDCA4Q9BXL8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.7■□□□□ 0.42
CDCA4Q9BXL8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.7■□□□□ 0.42
CDCA4Q9BXL8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CDCA4Q9BXL8 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDCA4Q9BXL8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.7■□□□□ 0.42
CDCA4Q9BXL8 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.7■□□□□ 0.42
CDCA4Q9BXL8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDCA4Q9BXL8 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA4Q9BXL8 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA4Q9BXL8 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA4Q9BXL8 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA4Q9BXL8 AL390961.4-201ENST00000623958 2535 ntBASIC17.69■□□□□ 0.42
CDCA4Q9BXL8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CDCA4Q9BXL8 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA4Q9BXL8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA4Q9BXL8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA4Q9BXL8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
CDCA4Q9BXL8 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA4Q9BXL8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA4Q9BXL8 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CDCA4Q9BXL8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA4Q9BXL8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.69■□□□□ 0.42
CDCA4Q9BXL8 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.69■□□□□ 0.42
CDCA4Q9BXL8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.69■□□□□ 0.42
CDCA4Q9BXL8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.69■□□□□ 0.42
CDCA4Q9BXL8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA4Q9BXL8 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA4Q9BXL8 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA4Q9BXL8 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA4Q9BXL8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.69■□□□□ 0.42
CDCA4Q9BXL8 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.69■□□□□ 0.42
CDCA4Q9BXL8 AC104581.1-202ENST00000635932 2618 ntBASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 KRT8P17-201ENST00000453110 1448 ntBASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 DUX4L2-201ENST00000561772 1275 ntBASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 AL356652.1-201ENST00000615962 565 ntBASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 RBM17P2-201ENST00000616397 1405 ntBASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 DUX4L6-201ENST00000626483 1275 ntBASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 DUX4L1-201ENST00000627662 1275 ntBASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 DUX4L8-201ENST00000629013 1275 ntBASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 DUX4L3-201ENST00000630187 1275 ntBASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 DUX4L7-201ENST00000630678 1275 ntBASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 DUX4L5-201ENST00000630834 1275 ntBASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA4Q9BXL8 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDCA4Q9BXL8 AL161938.1-201ENST00000569833 2180 ntBASIC17.67■□□□□ 0.42
CDCA4Q9BXL8 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDCA4Q9BXL8 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CDCA4Q9BXL8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms