Protein–RNA interactions for Protein: Q9BRN9

TM2D3, TM2 domain-containing protein 3, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3Q9BRN9 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TM2D3Q9BRN9 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM2D3Q9BRN9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC14.26□□□□□ -0.13
TM2D3Q9BRN9 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC14.26□□□□□ -0.13
TM2D3Q9BRN9 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM2D3Q9BRN9 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM2D3Q9BRN9 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM2D3Q9BRN9 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14.26□□□□□ -0.13
TM2D3Q9BRN9 BID-212ENST00000614949 1988 ntTSL 5 BASIC14.26□□□□□ -0.13
TM2D3Q9BRN9 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM2D3Q9BRN9 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM2D3Q9BRN9 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM2D3Q9BRN9 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC14.26□□□□□ -0.13
TM2D3Q9BRN9 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.26□□□□□ -0.13
TM2D3Q9BRN9 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.26□□□□□ -0.13
TM2D3Q9BRN9 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC14.26□□□□□ -0.13
TM2D3Q9BRN9 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.26□□□□□ -0.13
TM2D3Q9BRN9 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM2D3Q9BRN9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TM2D3Q9BRN9 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TM2D3Q9BRN9 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC14.26□□□□□ -0.13
TM2D3Q9BRN9 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM2D3Q9BRN9 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM2D3Q9BRN9 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TM2D3Q9BRN9 DPP3P2-201ENST00000416030 1696 ntBASIC14.26□□□□□ -0.13
TM2D3Q9BRN9 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TM2D3Q9BRN9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM2D3Q9BRN9 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
TM2D3Q9BRN9 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TM2D3Q9BRN9 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM2D3Q9BRN9 PLK5-205ENST00000642079 1969 ntBASIC14.25□□□□□ -0.13
TM2D3Q9BRN9 AC018553.1-201ENST00000616682 1458 ntBASIC14.25□□□□□ -0.13
TM2D3Q9BRN9 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM2D3Q9BRN9 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM2D3Q9BRN9 AL117328.2-201ENST00000624617 1940 ntBASIC14.25□□□□□ -0.13
TM2D3Q9BRN9 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM2D3Q9BRN9 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC14.25□□□□□ -0.13
TM2D3Q9BRN9 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM2D3Q9BRN9 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM2D3Q9BRN9 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
TM2D3Q9BRN9 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC14.25□□□□□ -0.13
TM2D3Q9BRN9 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
TM2D3Q9BRN9 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TM2D3Q9BRN9 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM2D3Q9BRN9 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM2D3Q9BRN9 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TM2D3Q9BRN9 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM2D3Q9BRN9 BX664615.1-201ENST00000443558 458 ntBASIC14.25□□□□□ -0.13
TM2D3Q9BRN9 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC14.25□□□□□ -0.13
TM2D3Q9BRN9 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.25□□□□□ -0.13
TM2D3Q9BRN9 LINC01238-205ENST00000567549 1107 ntBASIC14.25□□□□□ -0.13
TM2D3Q9BRN9 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TM2D3Q9BRN9 AP000692.2-201ENST00000608391 879 ntBASIC14.25□□□□□ -0.13
TM2D3Q9BRN9 FAM87A-204ENST00000613235 858 ntBASIC14.25□□□□□ -0.13
TM2D3Q9BRN9 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM2D3Q9BRN9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TM2D3Q9BRN9 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TM2D3Q9BRN9 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM2D3Q9BRN9 MED17-221ENST00000639724 2317 ntTSL 5 BASIC14.25□□□□□ -0.13
TM2D3Q9BRN9 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM2D3Q9BRN9 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TM2D3Q9BRN9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM2D3Q9BRN9 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM2D3Q9BRN9 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC14.24□□□□□ -0.13
TM2D3Q9BRN9 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC14.24□□□□□ -0.13
TM2D3Q9BRN9 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
TM2D3Q9BRN9 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM2D3Q9BRN9 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC14.24□□□□□ -0.13
TM2D3Q9BRN9 GOLGA6L3-201ENST00000507199 1679 ntBASIC14.24□□□□□ -0.13
TM2D3Q9BRN9 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TM2D3Q9BRN9 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TM2D3Q9BRN9 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TM2D3Q9BRN9 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM2D3Q9BRN9 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TM2D3Q9BRN9 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TM2D3Q9BRN9 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM2D3Q9BRN9 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC14.24□□□□□ -0.13
TM2D3Q9BRN9 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM2D3Q9BRN9 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM2D3Q9BRN9 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.24□□□□□ -0.13
TM2D3Q9BRN9 CYGB-204ENST00000589342 815 ntTSL 3 BASIC14.24□□□□□ -0.13
TM2D3Q9BRN9 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.24□□□□□ -0.13
TM2D3Q9BRN9 AC130371.2-201ENST00000619443 611 ntBASIC14.24□□□□□ -0.13
TM2D3Q9BRN9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC14.24□□□□□ -0.13
TM2D3Q9BRN9 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
TM2D3Q9BRN9 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC14.24□□□□□ -0.13
TM2D3Q9BRN9 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM2D3Q9BRN9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM2D3Q9BRN9 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM2D3Q9BRN9 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC14.24□□□□□ -0.13
TM2D3Q9BRN9 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TM2D3Q9BRN9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM2D3Q9BRN9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC14.24□□□□□ -0.13
TM2D3Q9BRN9 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TM2D3Q9BRN9 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TM2D3Q9BRN9 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC14.23□□□□□ -0.13
TM2D3Q9BRN9 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC14.23□□□□□ -0.13
TM2D3Q9BRN9 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TM2D3Q9BRN9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TM2D3Q9BRN9 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms