Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EBF4Q9BQW3 AL049812.1-201ENST00000432563 2267 ntBASIC19.25■□□□□ 0.67
EBF4Q9BQW3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EBF4Q9BQW3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
EBF4Q9BQW3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EBF4Q9BQW3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EBF4Q9BQW3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EBF4Q9BQW3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EBF4Q9BQW3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
EBF4Q9BQW3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.24■□□□□ 0.67
EBF4Q9BQW3 CYP21A1P-202ENST00000354927 1481 ntBASIC19.24■□□□□ 0.67
EBF4Q9BQW3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.24■□□□□ 0.67
EBF4Q9BQW3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.24■□□□□ 0.67
EBF4Q9BQW3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
EBF4Q9BQW3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EBF4Q9BQW3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.24■□□□□ 0.67
EBF4Q9BQW3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.24■□□□□ 0.67
EBF4Q9BQW3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.24■□□□□ 0.67
EBF4Q9BQW3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
EBF4Q9BQW3 AC104581.1-202ENST00000635932 2618 ntBASIC19.24■□□□□ 0.67
EBF4Q9BQW3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.24■□□□□ 0.67
EBF4Q9BQW3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
EBF4Q9BQW3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
EBF4Q9BQW3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EBF4Q9BQW3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EBF4Q9BQW3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EBF4Q9BQW3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EBF4Q9BQW3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EBF4Q9BQW3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
EBF4Q9BQW3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EBF4Q9BQW3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
EBF4Q9BQW3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.23■□□□□ 0.67
EBF4Q9BQW3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
EBF4Q9BQW3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
EBF4Q9BQW3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EBF4Q9BQW3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
EBF4Q9BQW3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.23■□□□□ 0.67
EBF4Q9BQW3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EBF4Q9BQW3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EBF4Q9BQW3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.23■□□□□ 0.67
EBF4Q9BQW3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
EBF4Q9BQW3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
EBF4Q9BQW3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EBF4Q9BQW3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EBF4Q9BQW3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
EBF4Q9BQW3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EBF4Q9BQW3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
EBF4Q9BQW3 AP001271.2-201ENST00000624018 1556 ntBASIC19.23■□□□□ 0.67
EBF4Q9BQW3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.23■□□□□ 0.67
EBF4Q9BQW3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
EBF4Q9BQW3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EBF4Q9BQW3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EBF4Q9BQW3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.22■□□□□ 0.67
EBF4Q9BQW3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EBF4Q9BQW3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
EBF4Q9BQW3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.22■□□□□ 0.67
EBF4Q9BQW3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EBF4Q9BQW3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.22■□□□□ 0.67
EBF4Q9BQW3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.22■□□□□ 0.67
EBF4Q9BQW3 AC004854.2-201ENST00000608450 1441 ntBASIC19.22■□□□□ 0.67
EBF4Q9BQW3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.22■□□□□ 0.67
EBF4Q9BQW3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EBF4Q9BQW3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EBF4Q9BQW3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EBF4Q9BQW3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
EBF4Q9BQW3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.22■□□□□ 0.67
EBF4Q9BQW3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EBF4Q9BQW3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EBF4Q9BQW3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.21■□□□□ 0.67
EBF4Q9BQW3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EBF4Q9BQW3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EBF4Q9BQW3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EBF4Q9BQW3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EBF4Q9BQW3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EBF4Q9BQW3 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.21■□□□□ 0.67
EBF4Q9BQW3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.21■□□□□ 0.67
EBF4Q9BQW3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.21■□□□□ 0.67
EBF4Q9BQW3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.21■□□□□ 0.67
EBF4Q9BQW3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.21■□□□□ 0.67
EBF4Q9BQW3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.21■□□□□ 0.67
EBF4Q9BQW3 TERF1P2-201ENST00000583350 1212 ntBASIC19.21■□□□□ 0.67
EBF4Q9BQW3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EBF4Q9BQW3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.21■□□□□ 0.67
EBF4Q9BQW3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EBF4Q9BQW3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
EBF4Q9BQW3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EBF4Q9BQW3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.21■□□□□ 0.67
EBF4Q9BQW3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EBF4Q9BQW3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EBF4Q9BQW3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
EBF4Q9BQW3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EBF4Q9BQW3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
EBF4Q9BQW3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EBF4Q9BQW3 KRT16P6-202ENST00000425692 1426 ntBASIC19.2■□□□□ 0.66
EBF4Q9BQW3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EBF4Q9BQW3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.2■□□□□ 0.66
EBF4Q9BQW3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.2■□□□□ 0.66
EBF4Q9BQW3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
EBF4Q9BQW3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.2■□□□□ 0.66
EBF4Q9BQW3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms