Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.57■□□□□ 0.4
USB1Q9BQ65 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.57■□□□□ 0.4
USB1Q9BQ65 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.57■□□□□ 0.4
USB1Q9BQ65 RPPH1-201ENST00000516869 333 ntBASIC17.57■□□□□ 0.4
USB1Q9BQ65 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.57■□□□□ 0.4
USB1Q9BQ65 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.57■□□□□ 0.4
USB1Q9BQ65 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.57■□□□□ 0.4
USB1Q9BQ65 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.57■□□□□ 0.4
USB1Q9BQ65 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
USB1Q9BQ65 AL359736.2-201ENST00000621992 437 ntBASIC17.57■□□□□ 0.4
USB1Q9BQ65 FAM197Y4-202ENST00000622692 608 ntBASIC17.57■□□□□ 0.4
USB1Q9BQ65 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.57■□□□□ 0.4
USB1Q9BQ65 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.57■□□□□ 0.4
USB1Q9BQ65 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.57■□□□□ 0.4
USB1Q9BQ65 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
USB1Q9BQ65 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
USB1Q9BQ65 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USB1Q9BQ65 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.57■□□□□ 0.4
USB1Q9BQ65 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USB1Q9BQ65 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
USB1Q9BQ65 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USB1Q9BQ65 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USB1Q9BQ65 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.56■□□□□ 0.4
USB1Q9BQ65 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USB1Q9BQ65 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
USB1Q9BQ65 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
USB1Q9BQ65 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
USB1Q9BQ65 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.56■□□□□ 0.4
USB1Q9BQ65 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USB1Q9BQ65 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
USB1Q9BQ65 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USB1Q9BQ65 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.56■□□□□ 0.4
USB1Q9BQ65 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.56■□□□□ 0.4
USB1Q9BQ65 AC133681.1-201ENST00000465482 601 ntBASIC17.56■□□□□ 0.4
USB1Q9BQ65 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.56■□□□□ 0.4
USB1Q9BQ65 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.56■□□□□ 0.4
USB1Q9BQ65 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
USB1Q9BQ65 AL121829.2-201ENST00000620908 328 ntBASIC17.56■□□□□ 0.4
USB1Q9BQ65 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
USB1Q9BQ65 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
USB1Q9BQ65 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
USB1Q9BQ65 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
USB1Q9BQ65 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
USB1Q9BQ65 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.56■□□□□ 0.4
USB1Q9BQ65 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
USB1Q9BQ65 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
USB1Q9BQ65 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
USB1Q9BQ65 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.56■□□□□ 0.4
USB1Q9BQ65 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USB1Q9BQ65 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USB1Q9BQ65 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USB1Q9BQ65 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
USB1Q9BQ65 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USB1Q9BQ65 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.55■□□□□ 0.4
USB1Q9BQ65 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USB1Q9BQ65 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
USB1Q9BQ65 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
USB1Q9BQ65 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USB1Q9BQ65 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
USB1Q9BQ65 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.55■□□□□ 0.4
USB1Q9BQ65 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
USB1Q9BQ65 C1QBPP2-201ENST00000528754 825 ntBASIC17.55■□□□□ 0.4
USB1Q9BQ65 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.55■□□□□ 0.4
USB1Q9BQ65 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC17.55■□□□□ 0.4
USB1Q9BQ65 MTDHP1-201ENST00000605323 784 ntBASIC17.55■□□□□ 0.4
USB1Q9BQ65 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.55■□□□□ 0.4
USB1Q9BQ65 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
USB1Q9BQ65 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
USB1Q9BQ65 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
USB1Q9BQ65 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
USB1Q9BQ65 KRT8P20-201ENST00000423953 1409 ntBASIC17.55■□□□□ 0.4
USB1Q9BQ65 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USB1Q9BQ65 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
USB1Q9BQ65 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.55■□□□□ 0.4
USB1Q9BQ65 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
USB1Q9BQ65 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.55■□□□□ 0.4
USB1Q9BQ65 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
USB1Q9BQ65 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USB1Q9BQ65 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
USB1Q9BQ65 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USB1Q9BQ65 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
USB1Q9BQ65 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
USB1Q9BQ65 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
USB1Q9BQ65 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
USB1Q9BQ65 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USB1Q9BQ65 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USB1Q9BQ65 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
USB1Q9BQ65 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.54■□□□□ 0.4
USB1Q9BQ65 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
USB1Q9BQ65 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.54■□□□□ 0.4
USB1Q9BQ65 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
USB1Q9BQ65 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.54■□□□□ 0.4
USB1Q9BQ65 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.54■□□□□ 0.4
USB1Q9BQ65 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
USB1Q9BQ65 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.54■□□□□ 0.4
USB1Q9BQ65 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
USB1Q9BQ65 AC006557.6-201ENST00000623071 864 ntBASIC17.54■□□□□ 0.4
USB1Q9BQ65 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
USB1Q9BQ65 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USB1Q9BQ65 AC006128.1-201ENST00000624704 1661 ntBASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms