Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.66■□□□□ 0.9
CDCA3Q99618 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.66■□□□□ 0.9
CDCA3Q99618 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.66■□□□□ 0.9
CDCA3Q99618 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
CDCA3Q99618 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.66■□□□□ 0.9
CDCA3Q99618 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA3Q99618 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA3Q99618 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.66■□□□□ 0.9
CDCA3Q99618 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CDCA3Q99618 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.66■□□□□ 0.9
CDCA3Q99618 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA3Q99618 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA3Q99618 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDCA3Q99618 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
CDCA3Q99618 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDCA3Q99618 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDCA3Q99618 PHGDH-210ENST00000641115 1638 ntBASIC20.65■□□□□ 0.9
CDCA3Q99618 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CDCA3Q99618 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.65■□□□□ 0.9
CDCA3Q99618 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CDCA3Q99618 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.65■□□□□ 0.9
CDCA3Q99618 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDCA3Q99618 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.65■□□□□ 0.9
CDCA3Q99618 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDCA3Q99618 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDCA3Q99618 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDCA3Q99618 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.64■□□□□ 0.9
CDCA3Q99618 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.64■□□□□ 0.89
CDCA3Q99618 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDCA3Q99618 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDCA3Q99618 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDCA3Q99618 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.64■□□□□ 0.89
CDCA3Q99618 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.64■□□□□ 0.89
CDCA3Q99618 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDCA3Q99618 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.64■□□□□ 0.89
CDCA3Q99618 PCED1CP-201ENST00000419887 785 ntBASIC20.64■□□□□ 0.89
CDCA3Q99618 KRT18P48-201ENST00000434763 852 ntBASIC20.64■□□□□ 0.89
CDCA3Q99618 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.64■□□□□ 0.89
CDCA3Q99618 AL023803.3-201ENST00000615559 522 ntBASIC20.64■□□□□ 0.89
CDCA3Q99618 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.64■□□□□ 0.89
CDCA3Q99618 AC011558.1-201ENST00000623459 338 ntBASIC20.64■□□□□ 0.89
CDCA3Q99618 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDCA3Q99618 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDCA3Q99618 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDCA3Q99618 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDCA3Q99618 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDCA3Q99618 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDCA3Q99618 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDCA3Q99618 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDCA3Q99618 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.63■□□□□ 0.89
CDCA3Q99618 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDCA3Q99618 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.63■□□□□ 0.89
CDCA3Q99618 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.63■□□□□ 0.89
CDCA3Q99618 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.63■□□□□ 0.89
CDCA3Q99618 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CDCA3Q99618 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDCA3Q99618 FAM86EP-206ENST00000510506 987 ntBASIC20.63■□□□□ 0.89
CDCA3Q99618 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.63■□□□□ 0.89
CDCA3Q99618 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.63■□□□□ 0.89
CDCA3Q99618 AL353719.1-201ENST00000566847 864 ntBASIC20.63■□□□□ 0.89
CDCA3Q99618 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDCA3Q99618 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDCA3Q99618 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDCA3Q99618 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.63■□□□□ 0.89
CDCA3Q99618 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CDCA3Q99618 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
CDCA3Q99618 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDCA3Q99618 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDCA3Q99618 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDCA3Q99618 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDCA3Q99618 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CDCA3Q99618 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDCA3Q99618 CA15P1-201ENST00000481698 905 ntBASIC20.62■□□□□ 0.89
CDCA3Q99618 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.62■□□□□ 0.89
CDCA3Q99618 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.62■□□□□ 0.89
CDCA3Q99618 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.62■□□□□ 0.89
CDCA3Q99618 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDCA3Q99618 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.62■□□□□ 0.89
CDCA3Q99618 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.62■□□□□ 0.89
CDCA3Q99618 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.62■□□□□ 0.89
CDCA3Q99618 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.62■□□□□ 0.89
CDCA3Q99618 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.62■□□□□ 0.89
CDCA3Q99618 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.62■□□□□ 0.89
CDCA3Q99618 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDCA3Q99618 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDCA3Q99618 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.62■□□□□ 0.89
CDCA3Q99618 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDCA3Q99618 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.62■□□□□ 0.89
CDCA3Q99618 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDCA3Q99618 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDCA3Q99618 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDCA3Q99618 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDCA3Q99618 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDCA3Q99618 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CDCA3Q99618 IER3-202ENST00000376377 1350 ntBASIC20.61■□□□□ 0.89
CDCA3Q99618 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CDCA3Q99618 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDCA3Q99618 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.61■□□□□ 0.89
CDCA3Q99618 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
CDCA3Q99618 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms