Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.52■□□□□ 0.88
CDK5RAP1Q96SZ6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
CDK5RAP1Q96SZ6 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CDK5RAP1Q96SZ6 TUBB8P6-201ENST00000436895 1288 ntBASIC20.52■□□□□ 0.88
CDK5RAP1Q96SZ6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.52■□□□□ 0.88
CDK5RAP1Q96SZ6 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDK5RAP1Q96SZ6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDK5RAP1Q96SZ6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDK5RAP1Q96SZ6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CDK5RAP1Q96SZ6 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.52■□□□□ 0.88
CDK5RAP1Q96SZ6 MIR4497-201ENST00000583208 89 ntBASIC20.52■□□□□ 0.88
CDK5RAP1Q96SZ6 AF186192.3-201ENST00000583427 947 ntBASIC20.52■□□□□ 0.88
CDK5RAP1Q96SZ6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.52■□□□□ 0.88
CDK5RAP1Q96SZ6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.52■□□□□ 0.88
CDK5RAP1Q96SZ6 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.52■□□□□ 0.88
CDK5RAP1Q96SZ6 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDK5RAP1Q96SZ6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDK5RAP1Q96SZ6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CDK5RAP1Q96SZ6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDK5RAP1Q96SZ6 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.52■□□□□ 0.87
CDK5RAP1Q96SZ6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.52■□□□□ 0.87
CDK5RAP1Q96SZ6 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDK5RAP1Q96SZ6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.51■□□□□ 0.87
CDK5RAP1Q96SZ6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDK5RAP1Q96SZ6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CDK5RAP1Q96SZ6 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDK5RAP1Q96SZ6 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDK5RAP1Q96SZ6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDK5RAP1Q96SZ6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDK5RAP1Q96SZ6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CDK5RAP1Q96SZ6 AP002982.1-201ENST00000492365 877 ntBASIC20.51■□□□□ 0.87
CDK5RAP1Q96SZ6 KRT18P16-201ENST00000510337 1294 ntBASIC20.51■□□□□ 0.87
CDK5RAP1Q96SZ6 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.51■□□□□ 0.87
CDK5RAP1Q96SZ6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.51■□□□□ 0.87
CDK5RAP1Q96SZ6 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.51■□□□□ 0.87
CDK5RAP1Q96SZ6 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDK5RAP1Q96SZ6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.51■□□□□ 0.87
CDK5RAP1Q96SZ6 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDK5RAP1Q96SZ6 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.51■□□□□ 0.87
CDK5RAP1Q96SZ6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDK5RAP1Q96SZ6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CDK5RAP1Q96SZ6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CDK5RAP1Q96SZ6 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.5■□□□□ 0.87
CDK5RAP1Q96SZ6 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDK5RAP1Q96SZ6 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.5■□□□□ 0.87
CDK5RAP1Q96SZ6 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDK5RAP1Q96SZ6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDK5RAP1Q96SZ6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CDK5RAP1Q96SZ6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDK5RAP1Q96SZ6 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDK5RAP1Q96SZ6 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.5■□□□□ 0.87
CDK5RAP1Q96SZ6 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
CDK5RAP1Q96SZ6 AL596275.1-201ENST00000423464 877 ntBASIC20.5■□□□□ 0.87
CDK5RAP1Q96SZ6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
CDK5RAP1Q96SZ6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.5■□□□□ 0.87
CDK5RAP1Q96SZ6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.5■□□□□ 0.87
CDK5RAP1Q96SZ6 AC073195.1-201ENST00000607241 877 ntBASIC20.5■□□□□ 0.87
CDK5RAP1Q96SZ6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.5■□□□□ 0.87
CDK5RAP1Q96SZ6 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDK5RAP1Q96SZ6 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CDK5RAP1Q96SZ6 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDK5RAP1Q96SZ6 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.5■□□□□ 0.87
CDK5RAP1Q96SZ6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDK5RAP1Q96SZ6 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDK5RAP1Q96SZ6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.49■□□□□ 0.87
CDK5RAP1Q96SZ6 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.49■□□□□ 0.87
CDK5RAP1Q96SZ6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDK5RAP1Q96SZ6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDK5RAP1Q96SZ6 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDK5RAP1Q96SZ6 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDK5RAP1Q96SZ6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDK5RAP1Q96SZ6 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDK5RAP1Q96SZ6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDK5RAP1Q96SZ6 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDK5RAP1Q96SZ6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.49■□□□□ 0.87
CDK5RAP1Q96SZ6 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDK5RAP1Q96SZ6 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDK5RAP1Q96SZ6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.49■□□□□ 0.87
CDK5RAP1Q96SZ6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDK5RAP1Q96SZ6 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.49■□□□□ 0.87
CDK5RAP1Q96SZ6 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDK5RAP1Q96SZ6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.49■□□□□ 0.87
CDK5RAP1Q96SZ6 KRT17P2-201ENST00000300992 1314 ntBASIC20.49■□□□□ 0.87
CDK5RAP1Q96SZ6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDK5RAP1Q96SZ6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDK5RAP1Q96SZ6 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDK5RAP1Q96SZ6 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDK5RAP1Q96SZ6 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDK5RAP1Q96SZ6 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDK5RAP1Q96SZ6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDK5RAP1Q96SZ6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDK5RAP1Q96SZ6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.48■□□□□ 0.87
CDK5RAP1Q96SZ6 SNORA78-201ENST00000459373 127 ntBASIC20.48■□□□□ 0.87
CDK5RAP1Q96SZ6 C1QL1P1-201ENST00000568105 661 ntBASIC20.48■□□□□ 0.87
CDK5RAP1Q96SZ6 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.48■□□□□ 0.87
CDK5RAP1Q96SZ6 MIR4785-201ENST00000585005 73 ntBASIC20.48■□□□□ 0.87
CDK5RAP1Q96SZ6 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.48■□□□□ 0.87
CDK5RAP1Q96SZ6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.48■□□□□ 0.87
CDK5RAP1Q96SZ6 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CDK5RAP1Q96SZ6 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms