Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
NEK1Q96PY6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
NEK1Q96PY6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.4■■□□□ 1.34
NEK1Q96PY6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC23.4■■□□□ 1.34
NEK1Q96PY6 RPS2P52-201ENST00000469610 820 ntBASIC23.4■■□□□ 1.34
NEK1Q96PY6 OR2A1-AS1-207ENST00000486094 819 ntBASIC23.4■■□□□ 1.34
NEK1Q96PY6 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
NEK1Q96PY6 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
NEK1Q96PY6 PWWP2AP1-201ENST00000429776 2273 ntBASIC23.4■■□□□ 1.34
NEK1Q96PY6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC23.4■■□□□ 1.34
NEK1Q96PY6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
NEK1Q96PY6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
NEK1Q96PY6 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
NEK1Q96PY6 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
NEK1Q96PY6 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC23.39■■□□□ 1.34
NEK1Q96PY6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
NEK1Q96PY6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
NEK1Q96PY6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC23.39■■□□□ 1.33
NEK1Q96PY6 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
NEK1Q96PY6 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC23.39■■□□□ 1.33
NEK1Q96PY6 APTR-205ENST00000447009 902 ntTSL 2 BASIC23.39■■□□□ 1.33
NEK1Q96PY6 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
NEK1Q96PY6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC23.39■■□□□ 1.33
NEK1Q96PY6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
NEK1Q96PY6 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC23.39■■□□□ 1.33
NEK1Q96PY6 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
NEK1Q96PY6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
NEK1Q96PY6 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
NEK1Q96PY6 TFP1-202ENST00000475455 1573 ntBASIC23.39■■□□□ 1.33
NEK1Q96PY6 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
NEK1Q96PY6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC23.39■■□□□ 1.33
NEK1Q96PY6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC23.38■■□□□ 1.33
NEK1Q96PY6 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
NEK1Q96PY6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
NEK1Q96PY6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC23.38■■□□□ 1.33
NEK1Q96PY6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
NEK1Q96PY6 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.38■■□□□ 1.33
NEK1Q96PY6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
NEK1Q96PY6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC23.38■■□□□ 1.33
NEK1Q96PY6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
NEK1Q96PY6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
NEK1Q96PY6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
NEK1Q96PY6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
NEK1Q96PY6 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC23.38■■□□□ 1.33
NEK1Q96PY6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC23.38■■□□□ 1.33
NEK1Q96PY6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NEK1Q96PY6 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
NEK1Q96PY6 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
NEK1Q96PY6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
NEK1Q96PY6 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
NEK1Q96PY6 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
NEK1Q96PY6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
NEK1Q96PY6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
NEK1Q96PY6 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NEK1Q96PY6 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
NEK1Q96PY6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC23.37■■□□□ 1.33
NEK1Q96PY6 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
NEK1Q96PY6 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC23.37■■□□□ 1.33
NEK1Q96PY6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC23.37■■□□□ 1.33
NEK1Q96PY6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC23.37■■□□□ 1.33
NEK1Q96PY6 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
NEK1Q96PY6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
NEK1Q96PY6 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
NEK1Q96PY6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC23.37■■□□□ 1.33
NEK1Q96PY6 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
NEK1Q96PY6 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NEK1Q96PY6 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
NEK1Q96PY6 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
NEK1Q96PY6 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NEK1Q96PY6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NEK1Q96PY6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
NEK1Q96PY6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NEK1Q96PY6 SOX15-203ENST00000570788 1093 ntBASIC23.36■■□□□ 1.33
NEK1Q96PY6 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC23.36■■□□□ 1.33
NEK1Q96PY6 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC23.36■■□□□ 1.33
NEK1Q96PY6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
NEK1Q96PY6 AC120498.8-201ENST00000614275 531 ntBASIC23.36■■□□□ 1.33
NEK1Q96PY6 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC23.36■■□□□ 1.33
NEK1Q96PY6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC23.36■■□□□ 1.33
NEK1Q96PY6 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NEK1Q96PY6 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
NEK1Q96PY6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
NEK1Q96PY6 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC23.36■■□□□ 1.33
NEK1Q96PY6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC23.36■■□□□ 1.33
NEK1Q96PY6 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC23.36■■□□□ 1.33
NEK1Q96PY6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC23.36■■□□□ 1.33
NEK1Q96PY6 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC23.36■■□□□ 1.33
NEK1Q96PY6 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
NEK1Q96PY6 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NEK1Q96PY6 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC23.35■■□□□ 1.33
NEK1Q96PY6 POLI-202ENST00000406285 2030 ntTSL 2 BASIC23.35■■□□□ 1.33
NEK1Q96PY6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC23.35■■□□□ 1.33
NEK1Q96PY6 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
NEK1Q96PY6 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NEK1Q96PY6 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NEK1Q96PY6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
NEK1Q96PY6 ABHD17AP1-201ENST00000358206 933 ntBASIC23.35■■□□□ 1.33
NEK1Q96PY6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NEK1Q96PY6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NEK1Q96PY6 ABHD17AP6-201ENST00000458502 1044 ntBASIC23.35■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms