Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.93■□□□□ 0.62
SLC46A1Q96NT5 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC46A1Q96NT5 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC46A1Q96NT5 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC46A1Q96NT5 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC46A1Q96NT5 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC46A1Q96NT5 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC46A1Q96NT5 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC46A1Q96NT5 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC46A1Q96NT5 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC46A1Q96NT5 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SLC46A1Q96NT5 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.92■□□□□ 0.62
SLC46A1Q96NT5 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC46A1Q96NT5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC46A1Q96NT5 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC46A1Q96NT5 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.92■□□□□ 0.62
SLC46A1Q96NT5 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC46A1Q96NT5 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SLC46A1Q96NT5 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC46A1Q96NT5 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.92■□□□□ 0.62
SLC46A1Q96NT5 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC46A1Q96NT5 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC46A1Q96NT5 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
SLC46A1Q96NT5 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC46A1Q96NT5 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.91■□□□□ 0.62
SLC46A1Q96NT5 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC46A1Q96NT5 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.91■□□□□ 0.62
SLC46A1Q96NT5 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC46A1Q96NT5 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC46A1Q96NT5 AC104076.2-201ENST00000448912 469 ntBASIC18.91■□□□□ 0.62
SLC46A1Q96NT5 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.91■□□□□ 0.62
SLC46A1Q96NT5 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.91■□□□□ 0.62
SLC46A1Q96NT5 DUX4L26-201ENST00000489078 1255 ntBASIC18.91■□□□□ 0.62
SLC46A1Q96NT5 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.91■□□□□ 0.62
SLC46A1Q96NT5 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.91■□□□□ 0.62
SLC46A1Q96NT5 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
SLC46A1Q96NT5 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC46A1Q96NT5 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.91■□□□□ 0.62
SLC46A1Q96NT5 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.91■□□□□ 0.62
SLC46A1Q96NT5 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC46A1Q96NT5 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC46A1Q96NT5 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC46A1Q96NT5 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC46A1Q96NT5 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.9■□□□□ 0.62
SLC46A1Q96NT5 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC46A1Q96NT5 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC46A1Q96NT5 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC46A1Q96NT5 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC46A1Q96NT5 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC46A1Q96NT5 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC46A1Q96NT5 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.9■□□□□ 0.62
SLC46A1Q96NT5 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC46A1Q96NT5 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.9■□□□□ 0.62
SLC46A1Q96NT5 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.9■□□□□ 0.62
SLC46A1Q96NT5 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC46A1Q96NT5 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.9■□□□□ 0.62
SLC46A1Q96NT5 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC46A1Q96NT5 NTF6B-201ENST00000591913 560 ntBASIC18.9■□□□□ 0.62
SLC46A1Q96NT5 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SLC46A1Q96NT5 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC46A1Q96NT5 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC46A1Q96NT5 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SLC46A1Q96NT5 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SLC46A1Q96NT5 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SLC46A1Q96NT5 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC46A1Q96NT5 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SLC46A1Q96NT5 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
SLC46A1Q96NT5 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC46A1Q96NT5 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC46A1Q96NT5 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC46A1Q96NT5 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC46A1Q96NT5 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC46A1Q96NT5 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC46A1Q96NT5 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC46A1Q96NT5 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC46A1Q96NT5 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC46A1Q96NT5 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC46A1Q96NT5 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
SLC46A1Q96NT5 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SLC46A1Q96NT5 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.88■□□□□ 0.61
SLC46A1Q96NT5 AL121603.2-201ENST00000557373 2117 ntBASIC18.88■□□□□ 0.61
SLC46A1Q96NT5 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC46A1Q96NT5 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.88■□□□□ 0.61
SLC46A1Q96NT5 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.88■□□□□ 0.61
SLC46A1Q96NT5 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC46A1Q96NT5 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.88■□□□□ 0.61
SLC46A1Q96NT5 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
SLC46A1Q96NT5 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.88■□□□□ 0.61
SLC46A1Q96NT5 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC46A1Q96NT5 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.88■□□□□ 0.61
SLC46A1Q96NT5 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.88■□□□□ 0.61
SLC46A1Q96NT5 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC46A1Q96NT5 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SLC46A1Q96NT5 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC46A1Q96NT5 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC46A1Q96NT5 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SLC46A1Q96NT5 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC46A1Q96NT5 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
SLC46A1Q96NT5 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC46A1Q96NT5 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms