Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 AC128688.1-201ENST00000487626 519 ntBASIC21.06■□□□□ 0.96
ZNF558Q96NG5 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
ZNF558Q96NG5 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF558Q96NG5 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
ZNF558Q96NG5 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF558Q96NG5 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF558Q96NG5 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
ZNF558Q96NG5 SLC25A1P4-201ENST00000567977 778 ntBASIC21.05■□□□□ 0.96
ZNF558Q96NG5 NTF6B-201ENST00000591913 560 ntBASIC21.05■□□□□ 0.96
ZNF558Q96NG5 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.05■□□□□ 0.96
ZNF558Q96NG5 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.05■□□□□ 0.96
ZNF558Q96NG5 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
ZNF558Q96NG5 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF558Q96NG5 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF558Q96NG5 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF558Q96NG5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.05■□□□□ 0.96
ZNF558Q96NG5 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF558Q96NG5 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF558Q96NG5 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.04■□□□□ 0.96
ZNF558Q96NG5 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF558Q96NG5 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF558Q96NG5 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF558Q96NG5 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF558Q96NG5 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF558Q96NG5 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
ZNF558Q96NG5 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
ZNF558Q96NG5 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.04■□□□□ 0.96
ZNF558Q96NG5 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
ZNF558Q96NG5 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF558Q96NG5 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF558Q96NG5 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
ZNF558Q96NG5 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.04■□□□□ 0.96
ZNF558Q96NG5 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
ZNF558Q96NG5 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF558Q96NG5 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF558Q96NG5 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
ZNF558Q96NG5 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF558Q96NG5 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF558Q96NG5 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
ZNF558Q96NG5 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
ZNF558Q96NG5 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF558Q96NG5 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.03■□□□□ 0.96
ZNF558Q96NG5 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.03■□□□□ 0.96
ZNF558Q96NG5 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF558Q96NG5 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF558Q96NG5 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF558Q96NG5 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF558Q96NG5 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF558Q96NG5 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.03■□□□□ 0.96
ZNF558Q96NG5 AC130371.2-201ENST00000619443 611 ntBASIC21.03■□□□□ 0.96
ZNF558Q96NG5 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.03■□□□□ 0.96
ZNF558Q96NG5 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF558Q96NG5 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
ZNF558Q96NG5 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF558Q96NG5 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
ZNF558Q96NG5 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.03■□□□□ 0.96
ZNF558Q96NG5 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.02■□□□□ 0.96
ZNF558Q96NG5 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF558Q96NG5 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF558Q96NG5 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF558Q96NG5 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF558Q96NG5 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
ZNF558Q96NG5 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.02■□□□□ 0.96
ZNF558Q96NG5 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.02■□□□□ 0.96
ZNF558Q96NG5 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.02■□□□□ 0.96
ZNF558Q96NG5 AP000692.2-201ENST00000608391 879 ntBASIC21.02■□□□□ 0.96
ZNF558Q96NG5 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
ZNF558Q96NG5 AC011298.2-201ENST00000617989 482 ntBASIC21.02■□□□□ 0.96
ZNF558Q96NG5 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.02■□□□□ 0.96
ZNF558Q96NG5 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF558Q96NG5 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF558Q96NG5 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.02■□□□□ 0.96
ZNF558Q96NG5 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF558Q96NG5 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF558Q96NG5 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF558Q96NG5 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.02■□□□□ 0.95
ZNF558Q96NG5 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.02■□□□□ 0.95
ZNF558Q96NG5 RCC2P6-201ENST00000526625 1557 ntBASIC21.02■□□□□ 0.95
ZNF558Q96NG5 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF558Q96NG5 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF558Q96NG5 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF558Q96NG5 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF558Q96NG5 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF558Q96NG5 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.01■□□□□ 0.95
ZNF558Q96NG5 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF558Q96NG5 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.01■□□□□ 0.95
ZNF558Q96NG5 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF558Q96NG5 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.01■□□□□ 0.95
ZNF558Q96NG5 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
ZNF558Q96NG5 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF558Q96NG5 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.01■□□□□ 0.95
ZNF558Q96NG5 HLA-A-209ENST00000638375 975 ntBASIC21.01■□□□□ 0.95
ZNF558Q96NG5 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF558Q96NG5 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF558Q96NG5 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF558Q96NG5 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF558Q96NG5 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
ZNF558Q96NG5 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
ZNF558Q96NG5 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ZNF558Q96NG5 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms