Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SUSD3Q96L08 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SUSD3Q96L08 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.98■□□□□ 0.95
SUSD3Q96L08 AC116562.2-201ENST00000507042 360 ntBASIC20.98■□□□□ 0.95
SUSD3Q96L08 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SUSD3Q96L08 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.98■□□□□ 0.95
SUSD3Q96L08 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.98■□□□□ 0.95
SUSD3Q96L08 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SUSD3Q96L08 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.98■□□□□ 0.95
SUSD3Q96L08 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SUSD3Q96L08 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SUSD3Q96L08 GABARAPL3-202ENST00000624044 1851 ntBASIC20.98■□□□□ 0.95
SUSD3Q96L08 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.98■□□□□ 0.95
SUSD3Q96L08 AP001271.2-201ENST00000624018 1556 ntBASIC20.97■□□□□ 0.95
SUSD3Q96L08 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SUSD3Q96L08 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.97■□□□□ 0.95
SUSD3Q96L08 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SUSD3Q96L08 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
SUSD3Q96L08 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SUSD3Q96L08 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.97■□□□□ 0.95
SUSD3Q96L08 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SUSD3Q96L08 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.97■□□□□ 0.95
SUSD3Q96L08 RBM17P1-201ENST00000453646 1190 ntBASIC20.97■□□□□ 0.95
SUSD3Q96L08 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.97■□□□□ 0.95
SUSD3Q96L08 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.97■□□□□ 0.95
SUSD3Q96L08 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.97■□□□□ 0.95
SUSD3Q96L08 LINC01023-201ENST00000606054 436 ntBASIC20.97■□□□□ 0.95
SUSD3Q96L08 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SUSD3Q96L08 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.97■□□□□ 0.95
SUSD3Q96L08 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SUSD3Q96L08 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SUSD3Q96L08 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SUSD3Q96L08 TMEM179-206ENST00000616017 1645 ntBASIC20.96■□□□□ 0.95
SUSD3Q96L08 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SUSD3Q96L08 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.96■□□□□ 0.95
SUSD3Q96L08 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SUSD3Q96L08 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SUSD3Q96L08 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.96■□□□□ 0.95
SUSD3Q96L08 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.96■□□□□ 0.95
SUSD3Q96L08 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
SUSD3Q96L08 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SUSD3Q96L08 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SUSD3Q96L08 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
SUSD3Q96L08 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.96■□□□□ 0.95
SUSD3Q96L08 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SUSD3Q96L08 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
SUSD3Q96L08 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.96■□□□□ 0.95
SUSD3Q96L08 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.96■□□□□ 0.95
SUSD3Q96L08 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.96■□□□□ 0.95
SUSD3Q96L08 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SUSD3Q96L08 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.96■□□□□ 0.95
SUSD3Q96L08 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.96■□□□□ 0.95
SUSD3Q96L08 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.96■□□□□ 0.95
SUSD3Q96L08 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.96■□□□□ 0.95
SUSD3Q96L08 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
SUSD3Q96L08 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SUSD3Q96L08 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.96■□□□□ 0.95
SUSD3Q96L08 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SUSD3Q96L08 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SUSD3Q96L08 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SUSD3Q96L08 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.95■□□□□ 0.94
SUSD3Q96L08 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SUSD3Q96L08 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SUSD3Q96L08 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SUSD3Q96L08 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SUSD3Q96L08 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SUSD3Q96L08 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SUSD3Q96L08 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SUSD3Q96L08 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SUSD3Q96L08 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SUSD3Q96L08 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.95■□□□□ 0.94
SUSD3Q96L08 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SUSD3Q96L08 AL031985.4-201ENST00000642138 673 ntBASIC20.95■□□□□ 0.94
SUSD3Q96L08 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SUSD3Q96L08 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.95■□□□□ 0.94
SUSD3Q96L08 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.95■□□□□ 0.94
SUSD3Q96L08 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SUSD3Q96L08 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SUSD3Q96L08 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SUSD3Q96L08 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.94■□□□□ 0.94
SUSD3Q96L08 AC079598.2-202ENST00000546624 1451 ntBASIC20.94■□□□□ 0.94
SUSD3Q96L08 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
SUSD3Q96L08 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SUSD3Q96L08 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SUSD3Q96L08 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SUSD3Q96L08 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SUSD3Q96L08 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
SUSD3Q96L08 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SUSD3Q96L08 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SUSD3Q96L08 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SUSD3Q96L08 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SUSD3Q96L08 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.94■□□□□ 0.94
SUSD3Q96L08 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.94■□□□□ 0.94
SUSD3Q96L08 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.94■□□□□ 0.94
SUSD3Q96L08 AC026271.3-201ENST00000571884 352 ntBASIC20.94■□□□□ 0.94
SUSD3Q96L08 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SUSD3Q96L08 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.94■□□□□ 0.94
SUSD3Q96L08 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.94■□□□□ 0.94
SUSD3Q96L08 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.94■□□□□ 0.94
SUSD3Q96L08 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms