Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHDQ96IW2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.03■□□□□ 0.8
SHDQ96IW2 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.03■□□□□ 0.8
SHDQ96IW2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHDQ96IW2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SHDQ96IW2 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHDQ96IW2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHDQ96IW2 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SHDQ96IW2 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SHDQ96IW2 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SHDQ96IW2 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.02■□□□□ 0.8
SHDQ96IW2 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.02■□□□□ 0.8
SHDQ96IW2 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHDQ96IW2 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.02■□□□□ 0.8
SHDQ96IW2 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHDQ96IW2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHDQ96IW2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHDQ96IW2 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHDQ96IW2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SHDQ96IW2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SHDQ96IW2 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.02■□□□□ 0.79
SHDQ96IW2 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SHDQ96IW2 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.01■□□□□ 0.79
SHDQ96IW2 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.01■□□□□ 0.79
SHDQ96IW2 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.01■□□□□ 0.79
SHDQ96IW2 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHDQ96IW2 AC018553.1-201ENST00000616682 1458 ntBASIC20.01■□□□□ 0.79
SHDQ96IW2 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHDQ96IW2 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SHDQ96IW2 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHDQ96IW2 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
SHDQ96IW2 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.01■□□□□ 0.79
SHDQ96IW2 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SHDQ96IW2 FAM86EP-206ENST00000510506 987 ntBASIC20.01■□□□□ 0.79
SHDQ96IW2 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.01■□□□□ 0.79
SHDQ96IW2 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.01■□□□□ 0.79
SHDQ96IW2 AC140113.3-201ENST00000605663 199 ntBASIC20.01■□□□□ 0.79
SHDQ96IW2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SHDQ96IW2 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHDQ96IW2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.01■□□□□ 0.79
SHDQ96IW2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHDQ96IW2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20■□□□□ 0.79
SHDQ96IW2 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHDQ96IW2 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20■□□□□ 0.79
SHDQ96IW2 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHDQ96IW2 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
SHDQ96IW2 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SHDQ96IW2 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20■□□□□ 0.79
SHDQ96IW2 CD70-202ENST00000423145 881 ntTSL 2 BASIC20■□□□□ 0.79
SHDQ96IW2 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20■□□□□ 0.79
SHDQ96IW2 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SHDQ96IW2 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
SHDQ96IW2 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHDQ96IW2 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20■□□□□ 0.79
SHDQ96IW2 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20■□□□□ 0.79
SHDQ96IW2 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20■□□□□ 0.79
SHDQ96IW2 AC011558.1-201ENST00000623459 338 ntBASIC20■□□□□ 0.79
SHDQ96IW2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHDQ96IW2 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20■□□□□ 0.79
SHDQ96IW2 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20■□□□□ 0.79
SHDQ96IW2 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20■□□□□ 0.79
SHDQ96IW2 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SHDQ96IW2 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SHDQ96IW2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20■□□□□ 0.79
SHDQ96IW2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20■□□□□ 0.79
SHDQ96IW2 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHDQ96IW2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHDQ96IW2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHDQ96IW2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHDQ96IW2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.99■□□□□ 0.79
SHDQ96IW2 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SHDQ96IW2 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.99■□□□□ 0.79
SHDQ96IW2 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.99■□□□□ 0.79
SHDQ96IW2 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHDQ96IW2 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.99■□□□□ 0.79
SHDQ96IW2 AL450487.1-201ENST00000426799 995 ntBASIC19.99■□□□□ 0.79
SHDQ96IW2 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SHDQ96IW2 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.99■□□□□ 0.79
SHDQ96IW2 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHDQ96IW2 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.99■□□□□ 0.79
SHDQ96IW2 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.99■□□□□ 0.79
SHDQ96IW2 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
SHDQ96IW2 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHDQ96IW2 AC092338.2-201ENST00000568827 1415 ntBASIC19.99■□□□□ 0.79
SHDQ96IW2 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SHDQ96IW2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHDQ96IW2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SHDQ96IW2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
SHDQ96IW2 AL049796.1-201ENST00000565336 1766 ntBASIC19.98■□□□□ 0.79
SHDQ96IW2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHDQ96IW2 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.98■□□□□ 0.79
SHDQ96IW2 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SHDQ96IW2 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.98■□□□□ 0.79
SHDQ96IW2 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SHDQ96IW2 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.98■□□□□ 0.79
SHDQ96IW2 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.98■□□□□ 0.79
SHDQ96IW2 AC093458.2-201ENST00000623150 629 ntBASIC19.98■□□□□ 0.79
SHDQ96IW2 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHDQ96IW2 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
SHDQ96IW2 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms