Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.56■■□□□ 1.04
TRIM43Q96BQ3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.56■■□□□ 1.04
TRIM43Q96BQ3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC21.56■■□□□ 1.04
TRIM43Q96BQ3 AL121603.2-201ENST00000557373 2117 ntBASIC21.56■■□□□ 1.04
TRIM43Q96BQ3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM43Q96BQ3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.56■■□□□ 1.04
TRIM43Q96BQ3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM43Q96BQ3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM43Q96BQ3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM43Q96BQ3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM43Q96BQ3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM43Q96BQ3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM43Q96BQ3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.56■■□□□ 1.04
TRIM43Q96BQ3 KRT18P38-201ENST00000449496 1282 ntBASIC21.56■■□□□ 1.04
TRIM43Q96BQ3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM43Q96BQ3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.56■■□□□ 1.04
TRIM43Q96BQ3 AC012313.10-201ENST00000623509 926 ntBASIC21.56■■□□□ 1.04
TRIM43Q96BQ3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.56■■□□□ 1.04
TRIM43Q96BQ3 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.56■■□□□ 1.04
TRIM43Q96BQ3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM43Q96BQ3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM43Q96BQ3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM43Q96BQ3 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.56■■□□□ 1.04
TRIM43Q96BQ3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM43Q96BQ3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.56■■□□□ 1.04
TRIM43Q96BQ3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.55■■□□□ 1.04
TRIM43Q96BQ3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
TRIM43Q96BQ3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM43Q96BQ3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM43Q96BQ3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM43Q96BQ3 PRSS44-201ENST00000515154 1146 ntBASIC21.55■■□□□ 1.04
TRIM43Q96BQ3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.55■■□□□ 1.04
TRIM43Q96BQ3 AC069148.1-201ENST00000608741 768 ntBASIC21.55■■□□□ 1.04
TRIM43Q96BQ3 AC018553.1-201ENST00000616682 1458 ntBASIC21.55■■□□□ 1.04
TRIM43Q96BQ3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.55■■□□□ 1.04
TRIM43Q96BQ3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM43Q96BQ3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM43Q96BQ3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM43Q96BQ3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
TRIM43Q96BQ3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM43Q96BQ3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.55■■□□□ 1.04
TRIM43Q96BQ3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
TRIM43Q96BQ3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM43Q96BQ3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM43Q96BQ3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM43Q96BQ3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM43Q96BQ3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
TRIM43Q96BQ3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.54■■□□□ 1.04
TRIM43Q96BQ3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM43Q96BQ3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.54■■□□□ 1.04
TRIM43Q96BQ3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.54■■□□□ 1.04
TRIM43Q96BQ3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.54■■□□□ 1.04
TRIM43Q96BQ3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.54■■□□□ 1.04
TRIM43Q96BQ3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM43Q96BQ3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.54■■□□□ 1.04
TRIM43Q96BQ3 AC140113.3-201ENST00000605663 199 ntBASIC21.54■■□□□ 1.04
TRIM43Q96BQ3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
TRIM43Q96BQ3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM43Q96BQ3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
TRIM43Q96BQ3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM43Q96BQ3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
TRIM43Q96BQ3 GUSBP5-202ENST00000510805 1989 ntBASIC21.54■■□□□ 1.04
TRIM43Q96BQ3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM43Q96BQ3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM43Q96BQ3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.53■■□□□ 1.04
TRIM43Q96BQ3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.53■■□□□ 1.04
TRIM43Q96BQ3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.53■■□□□ 1.04
TRIM43Q96BQ3 TSPY17P-201ENST00000450329 467 ntBASIC21.53■■□□□ 1.04
TRIM43Q96BQ3 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.53■■□□□ 1.04
TRIM43Q96BQ3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.53■■□□□ 1.04
TRIM43Q96BQ3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.53■■□□□ 1.04
TRIM43Q96BQ3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.53■■□□□ 1.04
TRIM43Q96BQ3 AL353719.1-201ENST00000566847 864 ntBASIC21.53■■□□□ 1.04
TRIM43Q96BQ3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
TRIM43Q96BQ3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.53■■□□□ 1.04
TRIM43Q96BQ3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
TRIM43Q96BQ3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM43Q96BQ3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM43Q96BQ3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
TRIM43Q96BQ3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.52■■□□□ 1.04
TRIM43Q96BQ3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM43Q96BQ3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.52■■□□□ 1.04
TRIM43Q96BQ3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM43Q96BQ3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.52■■□□□ 1.04
TRIM43Q96BQ3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM43Q96BQ3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM43Q96BQ3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM43Q96BQ3 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
TRIM43Q96BQ3 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.52■■□□□ 1.04
TRIM43Q96BQ3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.52■■□□□ 1.04
TRIM43Q96BQ3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
TRIM43Q96BQ3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.52■■□□□ 1.04
TRIM43Q96BQ3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.52■■□□□ 1.04
TRIM43Q96BQ3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.52■■□□□ 1.04
TRIM43Q96BQ3 AL691432.3-201ENST00000621860 400 ntBASIC21.52■■□□□ 1.04
TRIM43Q96BQ3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.52■■□□□ 1.04
TRIM43Q96BQ3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM43Q96BQ3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.52■■□□□ 1.04
TRIM43Q96BQ3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TRIM43Q96BQ3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.52■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms