Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.67■□□□□ 0.9
RNF34Q969K3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RNF34Q969K3 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.67■□□□□ 0.9
RNF34Q969K3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.67■□□□□ 0.9
RNF34Q969K3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF34Q969K3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.67■□□□□ 0.9
RNF34Q969K3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF34Q969K3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF34Q969K3 PCDHAC2-203ENST00000615316 3011 ntBASIC20.67■□□□□ 0.9
RNF34Q969K3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF34Q969K3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RNF34Q969K3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
RNF34Q969K3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF34Q969K3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF34Q969K3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
RNF34Q969K3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
RNF34Q969K3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.66■□□□□ 0.9
RNF34Q969K3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.66■□□□□ 0.9
RNF34Q969K3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF34Q969K3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF34Q969K3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF34Q969K3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF34Q969K3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF34Q969K3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF34Q969K3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF34Q969K3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF34Q969K3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF34Q969K3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF34Q969K3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF34Q969K3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RNF34Q969K3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF34Q969K3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF34Q969K3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF34Q969K3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF34Q969K3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF34Q969K3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF34Q969K3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF34Q969K3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF34Q969K3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
RNF34Q969K3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF34Q969K3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF34Q969K3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF34Q969K3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.65■□□□□ 0.9
RNF34Q969K3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF34Q969K3 AC128676.1-201ENST00000454392 318 ntBASIC20.65■□□□□ 0.9
RNF34Q969K3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF34Q969K3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF34Q969K3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.65■□□□□ 0.9
RNF34Q969K3 AC073648.6-201ENST00000641589 218 ntBASIC20.65■□□□□ 0.9
RNF34Q969K3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
RNF34Q969K3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF34Q969K3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF34Q969K3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF34Q969K3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF34Q969K3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RNF34Q969K3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
RNF34Q969K3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RNF34Q969K3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.64■□□□□ 0.9
RNF34Q969K3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF34Q969K3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF34Q969K3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF34Q969K3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.64■□□□□ 0.89
RNF34Q969K3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF34Q969K3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF34Q969K3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF34Q969K3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF34Q969K3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.64■□□□□ 0.89
RNF34Q969K3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RNF34Q969K3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF34Q969K3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF34Q969K3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF34Q969K3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF34Q969K3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
RNF34Q969K3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF34Q969K3 PHGDH-210ENST00000641115 1638 ntBASIC20.64■□□□□ 0.89
RNF34Q969K3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF34Q969K3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF34Q969K3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF34Q969K3 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF34Q969K3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF34Q969K3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF34Q969K3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.63■□□□□ 0.89
RNF34Q969K3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF34Q969K3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF34Q969K3 AC069544.1-201ENST00000609399 999 ntBASIC20.63■□□□□ 0.89
RNF34Q969K3 ITM2C-210ENST00000620962 501 ntBASIC20.63■□□□□ 0.89
RNF34Q969K3 AL121906.2-201ENST00000621597 723 ntBASIC20.63■□□□□ 0.89
RNF34Q969K3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF34Q969K3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RNF34Q969K3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF34Q969K3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF34Q969K3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF34Q969K3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF34Q969K3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF34Q969K3 AL691432.2-201ENST00000607222 2038 ntBASIC20.63■□□□□ 0.89
RNF34Q969K3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF34Q969K3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF34Q969K3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RNF34Q969K3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.62■□□□□ 0.89
RNF34Q969K3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms