Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.79■□□□□ 0.92
ATP2A3Q93084 AC073912.3-201ENST00000624414 853 ntBASIC20.79■□□□□ 0.92
ATP2A3Q93084 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.79■□□□□ 0.92
ATP2A3Q93084 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2A3Q93084 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2A3Q93084 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2A3Q93084 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2A3Q93084 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
ATP2A3Q93084 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2A3Q93084 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2A3Q93084 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
ATP2A3Q93084 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
ATP2A3Q93084 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
ATP2A3Q93084 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.78■□□□□ 0.92
ATP2A3Q93084 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
ATP2A3Q93084 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2A3Q93084 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.78■□□□□ 0.92
ATP2A3Q93084 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2A3Q93084 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2A3Q93084 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2A3Q93084 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2A3Q93084 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.78■□□□□ 0.92
ATP2A3Q93084 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2A3Q93084 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2A3Q93084 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2A3Q93084 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.78■□□□□ 0.92
ATP2A3Q93084 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.78■□□□□ 0.92
ATP2A3Q93084 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.78■□□□□ 0.92
ATP2A3Q93084 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.78■□□□□ 0.92
ATP2A3Q93084 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2A3Q93084 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
ATP2A3Q93084 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
ATP2A3Q93084 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2A3Q93084 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2A3Q93084 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.78■□□□□ 0.92
ATP2A3Q93084 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.78■□□□□ 0.92
ATP2A3Q93084 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2A3Q93084 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2A3Q93084 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.78■□□□□ 0.92
ATP2A3Q93084 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP2A3Q93084 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
ATP2A3Q93084 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.77■□□□□ 0.92
ATP2A3Q93084 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.77■□□□□ 0.92
ATP2A3Q93084 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP2A3Q93084 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP2A3Q93084 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ATP2A3Q93084 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
ATP2A3Q93084 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ATP2A3Q93084 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
ATP2A3Q93084 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.77■□□□□ 0.92
ATP2A3Q93084 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.77■□□□□ 0.92
ATP2A3Q93084 AL049637.2-201ENST00000641778 930 ntBASIC20.77■□□□□ 0.92
ATP2A3Q93084 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
ATP2A3Q93084 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.77■□□□□ 0.92
ATP2A3Q93084 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
ATP2A3Q93084 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
ATP2A3Q93084 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP2A3Q93084 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP2A3Q93084 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ATP2A3Q93084 AC073314.1-201ENST00000568729 2216 ntBASIC20.77■□□□□ 0.91
ATP2A3Q93084 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.77■□□□□ 0.91
ATP2A3Q93084 KRT17P2-201ENST00000300992 1314 ntBASIC20.77■□□□□ 0.91
ATP2A3Q93084 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ATP2A3Q93084 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ATP2A3Q93084 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2A3Q93084 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2A3Q93084 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.76■□□□□ 0.91
ATP2A3Q93084 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.76■□□□□ 0.91
ATP2A3Q93084 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2A3Q93084 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ATP2A3Q93084 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2A3Q93084 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2A3Q93084 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2A3Q93084 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.76■□□□□ 0.91
ATP2A3Q93084 RARRES2P10-201ENST00000564312 460 ntBASIC20.76■□□□□ 0.91
ATP2A3Q93084 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.76■□□□□ 0.91
ATP2A3Q93084 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
ATP2A3Q93084 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2A3Q93084 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
ATP2A3Q93084 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2A3Q93084 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2A3Q93084 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2A3Q93084 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.76■□□□□ 0.91
ATP2A3Q93084 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.76■□□□□ 0.91
ATP2A3Q93084 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A3Q93084 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A3Q93084 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A3Q93084 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A3Q93084 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
ATP2A3Q93084 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A3Q93084 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.75■□□□□ 0.91
ATP2A3Q93084 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A3Q93084 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A3Q93084 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A3Q93084 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A3Q93084 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.75■□□□□ 0.91
ATP2A3Q93084 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.75■□□□□ 0.91
ATP2A3Q93084 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2A3Q93084 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.75■□□□□ 0.91
ATP2A3Q93084 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms