Protein–RNA interactions for Protein: Q93009

USP7, Ubiquitin carboxyl-terminal hydrolase 7, humanhuman

Predictions only

Length 1,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP7Q93009 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP7Q93009 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP7Q93009 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.5■□□□□ 0.71
USP7Q93009 SNORA78-201ENST00000459373 127 ntBASIC19.5■□□□□ 0.71
USP7Q93009 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
USP7Q93009 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
USP7Q93009 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP7Q93009 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.5■□□□□ 0.71
USP7Q93009 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.5■□□□□ 0.71
USP7Q93009 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP7Q93009 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
USP7Q93009 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP7Q93009 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP7Q93009 AC087633.2-202ENST00000565166 1439 ntBASIC19.5■□□□□ 0.71
USP7Q93009 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP7Q93009 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP7Q93009 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP7Q93009 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.5■□□□□ 0.71
USP7Q93009 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP7Q93009 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP7Q93009 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP7Q93009 DPP3P2-201ENST00000416030 1696 ntBASIC19.49■□□□□ 0.71
USP7Q93009 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP7Q93009 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP7Q93009 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
USP7Q93009 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP7Q93009 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP7Q93009 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP7Q93009 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP7Q93009 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
USP7Q93009 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP7Q93009 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP7Q93009 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.49■□□□□ 0.71
USP7Q93009 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP7Q93009 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.49■□□□□ 0.71
USP7Q93009 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP7Q93009 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
USP7Q93009 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.49■□□□□ 0.71
USP7Q93009 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
USP7Q93009 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.49■□□□□ 0.71
USP7Q93009 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP7Q93009 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP7Q93009 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.49■□□□□ 0.71
USP7Q93009 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.49■□□□□ 0.71
USP7Q93009 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USP7Q93009 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP7Q93009 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP7Q93009 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP7Q93009 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USP7Q93009 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.48■□□□□ 0.71
USP7Q93009 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.48■□□□□ 0.71
USP7Q93009 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP7Q93009 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USP7Q93009 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.48■□□□□ 0.71
USP7Q93009 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.48■□□□□ 0.71
USP7Q93009 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP7Q93009 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.48■□□□□ 0.71
USP7Q93009 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
USP7Q93009 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP7Q93009 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP7Q93009 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.48■□□□□ 0.71
USP7Q93009 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USP7Q93009 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.48■□□□□ 0.71
USP7Q93009 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.48■□□□□ 0.71
USP7Q93009 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
USP7Q93009 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP7Q93009 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USP7Q93009 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.47■□□□□ 0.71
USP7Q93009 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP7Q93009 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP7Q93009 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
USP7Q93009 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP7Q93009 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP7Q93009 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USP7Q93009 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.47■□□□□ 0.71
USP7Q93009 PGM5P4-201ENST00000421970 445 ntBASIC19.47■□□□□ 0.71
USP7Q93009 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USP7Q93009 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.47■□□□□ 0.71
USP7Q93009 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.47■□□□□ 0.71
USP7Q93009 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USP7Q93009 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.47■□□□□ 0.71
USP7Q93009 AL356652.1-201ENST00000615962 565 ntBASIC19.47■□□□□ 0.71
USP7Q93009 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.47■□□□□ 0.71
USP7Q93009 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USP7Q93009 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USP7Q93009 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP7Q93009 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.47■□□□□ 0.71
USP7Q93009 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP7Q93009 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP7Q93009 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.47■□□□□ 0.71
USP7Q93009 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
USP7Q93009 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.47■□□□□ 0.71
USP7Q93009 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
USP7Q93009 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP7Q93009 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.46■□□□□ 0.71
USP7Q93009 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
USP7Q93009 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.46■□□□□ 0.71
USP7Q93009 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP7Q93009 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP7Q93009 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms