Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
SNED1Q8TER0 FEM1AP4-201ENST00000443167 1987 ntBASIC24.17■■□□□ 1.46
SNED1Q8TER0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SNED1Q8TER0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
SNED1Q8TER0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
SNED1Q8TER0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC24.17■■□□□ 1.46
SNED1Q8TER0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SNED1Q8TER0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
SNED1Q8TER0 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SNED1Q8TER0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
SNED1Q8TER0 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC24.17■■□□□ 1.46
SNED1Q8TER0 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
SNED1Q8TER0 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SNED1Q8TER0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SNED1Q8TER0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SNED1Q8TER0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SNED1Q8TER0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
SNED1Q8TER0 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SNED1Q8TER0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
SNED1Q8TER0 WWC2-AS2-201ENST00000578387 2183 ntBASIC24.16■■□□□ 1.46
SNED1Q8TER0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SNED1Q8TER0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
SNED1Q8TER0 PTPA-216ENST00000432651 857 ntTSL 2 BASIC24.16■■□□□ 1.46
SNED1Q8TER0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC24.16■■□□□ 1.46
SNED1Q8TER0 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC24.16■■□□□ 1.46
SNED1Q8TER0 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC24.16■■□□□ 1.46
SNED1Q8TER0 AC131212.4-201ENST00000623606 975 ntBASIC24.16■■□□□ 1.46
SNED1Q8TER0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
SNED1Q8TER0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SNED1Q8TER0 GOLGA6L3-201ENST00000507199 1679 ntBASIC24.16■■□□□ 1.46
SNED1Q8TER0 AC079834.2-201ENST00000609776 1949 ntBASIC24.16■■□□□ 1.46
SNED1Q8TER0 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SNED1Q8TER0 AC018553.1-201ENST00000616682 1458 ntBASIC24.15■■□□□ 1.46
SNED1Q8TER0 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
SNED1Q8TER0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
SNED1Q8TER0 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SNED1Q8TER0 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SNED1Q8TER0 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SNED1Q8TER0 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SNED1Q8TER0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC24.15■■□□□ 1.46
SNED1Q8TER0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SNED1Q8TER0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC24.15■■□□□ 1.46
SNED1Q8TER0 RNF152P1-201ENST00000397754 604 ntBASIC24.15■■□□□ 1.46
SNED1Q8TER0 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SNED1Q8TER0 MFAP1P1-201ENST00000442257 1255 ntBASIC24.15■■□□□ 1.46
SNED1Q8TER0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC24.15■■□□□ 1.46
SNED1Q8TER0 LINC01238-205ENST00000567549 1107 ntBASIC24.15■■□□□ 1.46
SNED1Q8TER0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
SNED1Q8TER0 AP000550.4-202ENST00000639755 178 ntBASIC24.15■■□□□ 1.46
SNED1Q8TER0 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SNED1Q8TER0 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SNED1Q8TER0 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SNED1Q8TER0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SNED1Q8TER0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC24.15■■□□□ 1.46
SNED1Q8TER0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
SNED1Q8TER0 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
SNED1Q8TER0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
SNED1Q8TER0 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
SNED1Q8TER0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
SNED1Q8TER0 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC24.14■■□□□ 1.46
SNED1Q8TER0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC24.14■■□□□ 1.46
SNED1Q8TER0 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SNED1Q8TER0 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SNED1Q8TER0 HIST1H2APS4-201ENST00000362070 348 ntBASIC24.14■■□□□ 1.45
SNED1Q8TER0 AC007663.1-201ENST00000438948 1240 ntBASIC24.14■■□□□ 1.45
SNED1Q8TER0 DUSP5P1-201ENST00000441325 1139 ntBASIC24.14■■□□□ 1.45
SNED1Q8TER0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
SNED1Q8TER0 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC24.14■■□□□ 1.45
SNED1Q8TER0 AC011298.2-201ENST00000617989 482 ntBASIC24.14■■□□□ 1.45
SNED1Q8TER0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SNED1Q8TER0 AC092338.2-201ENST00000568827 1415 ntBASIC24.14■■□□□ 1.45
SNED1Q8TER0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SNED1Q8TER0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SNED1Q8TER0 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SNED1Q8TER0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC24.13■■□□□ 1.45
SNED1Q8TER0 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SNED1Q8TER0 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC24.13■■□□□ 1.45
SNED1Q8TER0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SNED1Q8TER0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SNED1Q8TER0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
SNED1Q8TER0 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SNED1Q8TER0 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC24.13■■□□□ 1.45
SNED1Q8TER0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC24.13■■□□□ 1.45
SNED1Q8TER0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SNED1Q8TER0 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC24.13■■□□□ 1.45
SNED1Q8TER0 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SNED1Q8TER0 AF106564.1-201ENST00000607058 2553 ntBASIC24.13■■□□□ 1.45
SNED1Q8TER0 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
SNED1Q8TER0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SNED1Q8TER0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC24.12■■□□□ 1.45
SNED1Q8TER0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SNED1Q8TER0 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SNED1Q8TER0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SNED1Q8TER0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SNED1Q8TER0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SNED1Q8TER0 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC24.12■■□□□ 1.45
SNED1Q8TER0 TUBB8P6-201ENST00000436895 1288 ntBASIC24.12■■□□□ 1.45
SNED1Q8TER0 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC24.12■■□□□ 1.45
SNED1Q8TER0 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
SNED1Q8TER0 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms