Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.96■□□□□ 0.47
CHD6Q8TD26 SART3-203ENST00000546611 1184 ntBASIC17.96■□□□□ 0.47
CHD6Q8TD26 AP001005.1-201ENST00000571755 1248 ntBASIC17.96■□□□□ 0.47
CHD6Q8TD26 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.96■□□□□ 0.47
CHD6Q8TD26 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHD6Q8TD26 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
CHD6Q8TD26 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.96■□□□□ 0.46
CHD6Q8TD26 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.95■□□□□ 0.46
CHD6Q8TD26 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.95■□□□□ 0.46
CHD6Q8TD26 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.95■□□□□ 0.46
CHD6Q8TD26 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CHD6Q8TD26 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD6Q8TD26 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD6Q8TD26 AL031284.1-201ENST00000419297 478 ntBASIC17.95■□□□□ 0.46
CHD6Q8TD26 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.95■□□□□ 0.46
CHD6Q8TD26 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD6Q8TD26 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.95■□□□□ 0.46
CHD6Q8TD26 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC17.95■□□□□ 0.46
CHD6Q8TD26 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD6Q8TD26 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD6Q8TD26 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CHD6Q8TD26 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.95■□□□□ 0.46
CHD6Q8TD26 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD6Q8TD26 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CHD6Q8TD26 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.95■□□□□ 0.46
CHD6Q8TD26 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.95■□□□□ 0.46
CHD6Q8TD26 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CHD6Q8TD26 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CHD6Q8TD26 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHD6Q8TD26 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.95■□□□□ 0.46
CHD6Q8TD26 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.95■□□□□ 0.46
CHD6Q8TD26 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.95■□□□□ 0.46
CHD6Q8TD26 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.95■□□□□ 0.46
CHD6Q8TD26 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.95■□□□□ 0.46
CHD6Q8TD26 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.95■□□□□ 0.46
CHD6Q8TD26 LINC01711-201ENST00000598340 967 ntBASIC17.95■□□□□ 0.46
CHD6Q8TD26 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD6Q8TD26 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.95■□□□□ 0.46
CHD6Q8TD26 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.94■□□□□ 0.46
CHD6Q8TD26 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.94■□□□□ 0.46
CHD6Q8TD26 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.94■□□□□ 0.46
CHD6Q8TD26 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CHD6Q8TD26 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHD6Q8TD26 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.94■□□□□ 0.46
CHD6Q8TD26 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.94■□□□□ 0.46
CHD6Q8TD26 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.94■□□□□ 0.46
CHD6Q8TD26 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHD6Q8TD26 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.94■□□□□ 0.46
CHD6Q8TD26 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
CHD6Q8TD26 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHD6Q8TD26 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHD6Q8TD26 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.94■□□□□ 0.46
CHD6Q8TD26 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHD6Q8TD26 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHD6Q8TD26 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHD6Q8TD26 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.94■□□□□ 0.46
CHD6Q8TD26 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHD6Q8TD26 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.94■□□□□ 0.46
CHD6Q8TD26 AC092364.2-202ENST00000597012 1073 ntBASIC17.94■□□□□ 0.46
CHD6Q8TD26 AC027601.4-201ENST00000611259 610 ntBASIC17.94■□□□□ 0.46
CHD6Q8TD26 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC17.94■□□□□ 0.46
CHD6Q8TD26 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHD6Q8TD26 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHD6Q8TD26 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHD6Q8TD26 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.93■□□□□ 0.46
CHD6Q8TD26 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHD6Q8TD26 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.93■□□□□ 0.46
CHD6Q8TD26 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.93■□□□□ 0.46
CHD6Q8TD26 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHD6Q8TD26 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHD6Q8TD26 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHD6Q8TD26 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.93■□□□□ 0.46
CHD6Q8TD26 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHD6Q8TD26 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CHD6Q8TD26 AC073648.2-201ENST00000510116 352 ntBASIC17.93■□□□□ 0.46
CHD6Q8TD26 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.93■□□□□ 0.46
CHD6Q8TD26 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CHD6Q8TD26 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHD6Q8TD26 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.93■□□□□ 0.46
CHD6Q8TD26 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHD6Q8TD26 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHD6Q8TD26 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHD6Q8TD26 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHD6Q8TD26 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHD6Q8TD26 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHD6Q8TD26 KRT16P6-202ENST00000425692 1426 ntBASIC17.93■□□□□ 0.46
CHD6Q8TD26 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHD6Q8TD26 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHD6Q8TD26 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.92■□□□□ 0.46
CHD6Q8TD26 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.92■□□□□ 0.46
CHD6Q8TD26 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.92■□□□□ 0.46
CHD6Q8TD26 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHD6Q8TD26 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHD6Q8TD26 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHD6Q8TD26 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.92■□□□□ 0.46
CHD6Q8TD26 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHD6Q8TD26 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CHD6Q8TD26 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHD6Q8TD26 RASA4DP-201ENST00000460726 1199 ntBASIC17.92■□□□□ 0.46
CHD6Q8TD26 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms