Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LMO3Q8TAP4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LMO3Q8TAP4 AC093484.2-201ENST00000580996 2166 ntBASIC21.22■□□□□ 0.99
LMO3Q8TAP4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LMO3Q8TAP4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LMO3Q8TAP4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.22■□□□□ 0.99
LMO3Q8TAP4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LMO3Q8TAP4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.22■□□□□ 0.99
LMO3Q8TAP4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.22■□□□□ 0.99
LMO3Q8TAP4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
LMO3Q8TAP4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
LMO3Q8TAP4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
LMO3Q8TAP4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LMO3Q8TAP4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.21■□□□□ 0.99
LMO3Q8TAP4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LMO3Q8TAP4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LMO3Q8TAP4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LMO3Q8TAP4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
LMO3Q8TAP4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
LMO3Q8TAP4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LMO3Q8TAP4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LMO3Q8TAP4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
LMO3Q8TAP4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LMO3Q8TAP4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LMO3Q8TAP4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.21■□□□□ 0.99
LMO3Q8TAP4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LMO3Q8TAP4 UNC93B4-201ENST00000505679 747 ntBASIC21.21■□□□□ 0.99
LMO3Q8TAP4 UNC93B5-201ENST00000530315 699 ntBASIC21.21■□□□□ 0.99
LMO3Q8TAP4 AC008403.3-201ENST00000598924 454 ntBASIC21.21■□□□□ 0.99
LMO3Q8TAP4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.21■□□□□ 0.99
LMO3Q8TAP4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LMO3Q8TAP4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
LMO3Q8TAP4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LMO3Q8TAP4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
LMO3Q8TAP4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
LMO3Q8TAP4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.2■□□□□ 0.99
LMO3Q8TAP4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LMO3Q8TAP4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
LMO3Q8TAP4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LMO3Q8TAP4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LMO3Q8TAP4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.2■□□□□ 0.98
LMO3Q8TAP4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LMO3Q8TAP4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
LMO3Q8TAP4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LMO3Q8TAP4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
LMO3Q8TAP4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.2■□□□□ 0.98
LMO3Q8TAP4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.2■□□□□ 0.98
LMO3Q8TAP4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LMO3Q8TAP4 AC008687.6-201ENST00000596318 630 ntBASIC21.2■□□□□ 0.98
LMO3Q8TAP4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LMO3Q8TAP4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LMO3Q8TAP4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
LMO3Q8TAP4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LMO3Q8TAP4 AC007952.6-201ENST00000573168 2673 ntBASIC21.2■□□□□ 0.98
LMO3Q8TAP4 AC003957.1-201ENST00000625108 2673 ntBASIC21.2■□□□□ 0.98
LMO3Q8TAP4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LMO3Q8TAP4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LMO3Q8TAP4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LMO3Q8TAP4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LMO3Q8TAP4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LMO3Q8TAP4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LMO3Q8TAP4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
LMO3Q8TAP4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LMO3Q8TAP4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.19■□□□□ 0.98
LMO3Q8TAP4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.19■□□□□ 0.98
LMO3Q8TAP4 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.19■□□□□ 0.98
LMO3Q8TAP4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.19■□□□□ 0.98
LMO3Q8TAP4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.19■□□□□ 0.98
LMO3Q8TAP4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.19■□□□□ 0.98
LMO3Q8TAP4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.19■□□□□ 0.98
LMO3Q8TAP4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.19■□□□□ 0.98
LMO3Q8TAP4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LMO3Q8TAP4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.19■□□□□ 0.98
LMO3Q8TAP4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LMO3Q8TAP4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LMO3Q8TAP4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.19■□□□□ 0.98
LMO3Q8TAP4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LMO3Q8TAP4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.19■□□□□ 0.98
LMO3Q8TAP4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
LMO3Q8TAP4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.19■□□□□ 0.98
LMO3Q8TAP4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.18■□□□□ 0.98
LMO3Q8TAP4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LMO3Q8TAP4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LMO3Q8TAP4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.18■□□□□ 0.98
LMO3Q8TAP4 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.18■□□□□ 0.98
LMO3Q8TAP4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LMO3Q8TAP4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
LMO3Q8TAP4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
LMO3Q8TAP4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LMO3Q8TAP4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LMO3Q8TAP4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LMO3Q8TAP4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LMO3Q8TAP4 Z82202.1-201ENST00000623446 1880 ntBASIC21.18■□□□□ 0.98
LMO3Q8TAP4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LMO3Q8TAP4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
LMO3Q8TAP4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LMO3Q8TAP4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LMO3Q8TAP4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
LMO3Q8TAP4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LMO3Q8TAP4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms