Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLHC1Q8NHS4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.93■□□□□ 0.62
CLHC1Q8NHS4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CLHC1Q8NHS4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CLHC1Q8NHS4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CLHC1Q8NHS4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CLHC1Q8NHS4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.93■□□□□ 0.62
CLHC1Q8NHS4 AC005332.7-201ENST00000614046 2005 ntBASIC18.93■□□□□ 0.62
CLHC1Q8NHS4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLHC1Q8NHS4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLHC1Q8NHS4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLHC1Q8NHS4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CLHC1Q8NHS4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLHC1Q8NHS4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
CLHC1Q8NHS4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLHC1Q8NHS4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLHC1Q8NHS4 C2orf69P4-201ENST00000565394 541 ntBASIC18.93■□□□□ 0.62
CLHC1Q8NHS4 AC092437.1-201ENST00000624794 1048 ntBASIC18.93■□□□□ 0.62
CLHC1Q8NHS4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLHC1Q8NHS4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLHC1Q8NHS4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
CLHC1Q8NHS4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.93■□□□□ 0.62
CLHC1Q8NHS4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLHC1Q8NHS4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLHC1Q8NHS4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.93■□□□□ 0.62
CLHC1Q8NHS4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLHC1Q8NHS4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CLHC1Q8NHS4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLHC1Q8NHS4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLHC1Q8NHS4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.92■□□□□ 0.62
CLHC1Q8NHS4 AC098818.2-201ENST00000564925 2320 ntBASIC18.92■□□□□ 0.62
CLHC1Q8NHS4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLHC1Q8NHS4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLHC1Q8NHS4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.92■□□□□ 0.62
CLHC1Q8NHS4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLHC1Q8NHS4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLHC1Q8NHS4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLHC1Q8NHS4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.92■□□□□ 0.62
CLHC1Q8NHS4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLHC1Q8NHS4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.92■□□□□ 0.62
CLHC1Q8NHS4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLHC1Q8NHS4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLHC1Q8NHS4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.92■□□□□ 0.62
CLHC1Q8NHS4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLHC1Q8NHS4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.92■□□□□ 0.62
CLHC1Q8NHS4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLHC1Q8NHS4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLHC1Q8NHS4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.92■□□□□ 0.62
CLHC1Q8NHS4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.92■□□□□ 0.62
CLHC1Q8NHS4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.92■□□□□ 0.62
CLHC1Q8NHS4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.92■□□□□ 0.62
CLHC1Q8NHS4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.92■□□□□ 0.62
CLHC1Q8NHS4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLHC1Q8NHS4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLHC1Q8NHS4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLHC1Q8NHS4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
CLHC1Q8NHS4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.91■□□□□ 0.62
CLHC1Q8NHS4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.91■□□□□ 0.62
CLHC1Q8NHS4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLHC1Q8NHS4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLHC1Q8NHS4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLHC1Q8NHS4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLHC1Q8NHS4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLHC1Q8NHS4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLHC1Q8NHS4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLHC1Q8NHS4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLHC1Q8NHS4 HLA-G-202ENST00000376815 851 ntBASIC18.91■□□□□ 0.62
CLHC1Q8NHS4 HLA-G-203ENST00000376818 1127 ntBASIC18.91■□□□□ 0.62
CLHC1Q8NHS4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.91■□□□□ 0.62
CLHC1Q8NHS4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLHC1Q8NHS4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.91■□□□□ 0.62
CLHC1Q8NHS4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.91■□□□□ 0.62
CLHC1Q8NHS4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.91■□□□□ 0.62
CLHC1Q8NHS4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CLHC1Q8NHS4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLHC1Q8NHS4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.91■□□□□ 0.62
CLHC1Q8NHS4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLHC1Q8NHS4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.91■□□□□ 0.62
CLHC1Q8NHS4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
CLHC1Q8NHS4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLHC1Q8NHS4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLHC1Q8NHS4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CLHC1Q8NHS4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLHC1Q8NHS4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.91■□□□□ 0.62
CLHC1Q8NHS4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLHC1Q8NHS4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLHC1Q8NHS4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.9■□□□□ 0.62
CLHC1Q8NHS4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLHC1Q8NHS4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLHC1Q8NHS4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.9■□□□□ 0.62
CLHC1Q8NHS4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLHC1Q8NHS4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLHC1Q8NHS4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.9■□□□□ 0.62
CLHC1Q8NHS4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CLHC1Q8NHS4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLHC1Q8NHS4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.9■□□□□ 0.62
CLHC1Q8NHS4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.9■□□□□ 0.62
CLHC1Q8NHS4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLHC1Q8NHS4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLHC1Q8NHS4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms