Protein–RNA interactions for Protein: Q8NG06

TRIM58, E3 ubiquitin-protein ligase TRIM58, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58Q8NG06 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM58Q8NG06 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM58Q8NG06 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
TRIM58Q8NG06 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM58Q8NG06 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM58Q8NG06 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.97■□□□□ 0.95
TRIM58Q8NG06 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM58Q8NG06 KRT18P14-201ENST00000534205 1250 ntBASIC20.97■□□□□ 0.95
TRIM58Q8NG06 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM58Q8NG06 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM58Q8NG06 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM58Q8NG06 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM58Q8NG06 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM58Q8NG06 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TRIM58Q8NG06 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM58Q8NG06 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
TRIM58Q8NG06 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM58Q8NG06 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM58Q8NG06 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM58Q8NG06 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM58Q8NG06 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM58Q8NG06 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM58Q8NG06 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TRIM58Q8NG06 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM58Q8NG06 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM58Q8NG06 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.96■□□□□ 0.95
TRIM58Q8NG06 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.96■□□□□ 0.95
TRIM58Q8NG06 AL162412.1-201ENST00000567129 965 ntBASIC20.96■□□□□ 0.95
TRIM58Q8NG06 MYCNOS-205ENST00000641950 531 ntBASIC20.96■□□□□ 0.95
TRIM58Q8NG06 AL138781.2-201ENST00000617896 1843 ntBASIC20.96■□□□□ 0.95
TRIM58Q8NG06 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TRIM58Q8NG06 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TRIM58Q8NG06 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM58Q8NG06 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM58Q8NG06 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM58Q8NG06 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM58Q8NG06 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM58Q8NG06 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.96■□□□□ 0.95
TRIM58Q8NG06 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.96■□□□□ 0.95
TRIM58Q8NG06 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM58Q8NG06 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM58Q8NG06 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.95■□□□□ 0.94
TRIM58Q8NG06 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM58Q8NG06 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
TRIM58Q8NG06 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
TRIM58Q8NG06 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM58Q8NG06 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.95■□□□□ 0.94
TRIM58Q8NG06 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TRIM58Q8NG06 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.95■□□□□ 0.94
TRIM58Q8NG06 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.95■□□□□ 0.94
TRIM58Q8NG06 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM58Q8NG06 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TRIM58Q8NG06 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
TRIM58Q8NG06 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM58Q8NG06 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM58Q8NG06 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.94■□□□□ 0.94
TRIM58Q8NG06 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM58Q8NG06 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM58Q8NG06 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM58Q8NG06 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
TRIM58Q8NG06 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM58Q8NG06 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM58Q8NG06 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
TRIM58Q8NG06 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM58Q8NG06 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM58Q8NG06 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM58Q8NG06 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM58Q8NG06 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM58Q8NG06 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM58Q8NG06 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.94■□□□□ 0.94
TRIM58Q8NG06 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
TRIM58Q8NG06 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM58Q8NG06 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.94■□□□□ 0.94
TRIM58Q8NG06 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM58Q8NG06 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
TRIM58Q8NG06 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM58Q8NG06 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM58Q8NG06 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM58Q8NG06 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM58Q8NG06 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM58Q8NG06 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM58Q8NG06 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM58Q8NG06 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM58Q8NG06 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
TRIM58Q8NG06 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM58Q8NG06 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM58Q8NG06 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM58Q8NG06 TERF1P5-201ENST00000477545 1207 ntBASIC20.93■□□□□ 0.94
TRIM58Q8NG06 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM58Q8NG06 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.93■□□□□ 0.94
TRIM58Q8NG06 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM58Q8NG06 NEFHP1-201ENST00000412845 2629 ntBASIC20.93■□□□□ 0.94
TRIM58Q8NG06 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM58Q8NG06 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM58Q8NG06 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM58Q8NG06 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
TRIM58Q8NG06 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM58Q8NG06 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM58Q8NG06 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM58Q8NG06 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms