Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC16.58■□□□□ 0.24
CCDC168Q8NDH2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC168Q8NDH2 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CCDC168Q8NDH2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC168Q8NDH2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CCDC168Q8NDH2 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.58■□□□□ 0.24
CCDC168Q8NDH2 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC168Q8NDH2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC168Q8NDH2 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC168Q8NDH2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC168Q8NDH2 KRT8P36-201ENST00000489121 1440 ntBASIC16.57■□□□□ 0.24
CCDC168Q8NDH2 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CCDC168Q8NDH2 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC168Q8NDH2 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC168Q8NDH2 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC168Q8NDH2 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.57■□□□□ 0.24
CCDC168Q8NDH2 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC168Q8NDH2 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC168Q8NDH2 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.57■□□□□ 0.24
CCDC168Q8NDH2 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC168Q8NDH2 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC168Q8NDH2 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC168Q8NDH2 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC168Q8NDH2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC168Q8NDH2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC168Q8NDH2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC168Q8NDH2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC168Q8NDH2 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC168Q8NDH2 TSPY17P-201ENST00000450329 467 ntBASIC16.57■□□□□ 0.24
CCDC168Q8NDH2 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC168Q8NDH2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC168Q8NDH2 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
CCDC168Q8NDH2 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CCDC168Q8NDH2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC168Q8NDH2 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC168Q8NDH2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
CCDC168Q8NDH2 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CCDC168Q8NDH2 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.56■□□□□ 0.24
CCDC168Q8NDH2 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CCDC168Q8NDH2 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC168Q8NDH2 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CCDC168Q8NDH2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
CCDC168Q8NDH2 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC168Q8NDH2 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC168Q8NDH2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC168Q8NDH2 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC168Q8NDH2 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC168Q8NDH2 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.56■□□□□ 0.24
CCDC168Q8NDH2 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.56■□□□□ 0.24
CCDC168Q8NDH2 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC168Q8NDH2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC168Q8NDH2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC168Q8NDH2 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC168Q8NDH2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC168Q8NDH2 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC168Q8NDH2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC16.55■□□□□ 0.24
CCDC168Q8NDH2 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CCDC168Q8NDH2 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC168Q8NDH2 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC168Q8NDH2 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC168Q8NDH2 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.55■□□□□ 0.24
CCDC168Q8NDH2 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.55■□□□□ 0.24
CCDC168Q8NDH2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC168Q8NDH2 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC168Q8NDH2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC168Q8NDH2 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC168Q8NDH2 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC168Q8NDH2 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC168Q8NDH2 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CCDC168Q8NDH2 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.55■□□□□ 0.24
CCDC168Q8NDH2 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.55■□□□□ 0.24
CCDC168Q8NDH2 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC168Q8NDH2 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
CCDC168Q8NDH2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC16.54■□□□□ 0.24
CCDC168Q8NDH2 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CCDC168Q8NDH2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC168Q8NDH2 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC168Q8NDH2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC168Q8NDH2 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC168Q8NDH2 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
CCDC168Q8NDH2 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC168Q8NDH2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC168Q8NDH2 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC168Q8NDH2 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.54■□□□□ 0.24
CCDC168Q8NDH2 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC168Q8NDH2 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC168Q8NDH2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC168Q8NDH2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
CCDC168Q8NDH2 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC168Q8NDH2 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CCDC168Q8NDH2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CCDC168Q8NDH2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC168Q8NDH2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC168Q8NDH2 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC168Q8NDH2 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC168Q8NDH2 AC004870.1-201ENST00000315132 882 ntBASIC16.53■□□□□ 0.24
CCDC168Q8NDH2 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC168Q8NDH2 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC168Q8NDH2 KRT18P38-201ENST00000449496 1282 ntBASIC16.53■□□□□ 0.24
CCDC168Q8NDH2 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms