Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
XRN1Q8IZH2 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
XRN1Q8IZH2 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC27.62■■■□□ 2.01
XRN1Q8IZH2 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
XRN1Q8IZH2 HCG4P8-203ENST00000443049 980 ntBASIC27.62■■■□□ 2.01
XRN1Q8IZH2 CD81-212ENST00000526072 1172 ntTSL 5 BASIC27.62■■■□□ 2.01
XRN1Q8IZH2 AC069148.1-201ENST00000608741 768 ntBASIC27.62■■■□□ 2.01
XRN1Q8IZH2 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC27.62■■■□□ 2.01
XRN1Q8IZH2 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC27.62■■■□□ 2.01
XRN1Q8IZH2 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
XRN1Q8IZH2 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC27.62■■■□□ 2.01
XRN1Q8IZH2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
XRN1Q8IZH2 AL671277.2-201ENST00000458060 996 ntBASIC27.61■■■□□ 2.01
XRN1Q8IZH2 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC27.61■■■□□ 2.01
XRN1Q8IZH2 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC27.61■■■□□ 2.01
XRN1Q8IZH2 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC27.61■■■□□ 2.01
XRN1Q8IZH2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
XRN1Q8IZH2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
XRN1Q8IZH2 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
XRN1Q8IZH2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC27.61■■■□□ 2.01
XRN1Q8IZH2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC27.61■■■□□ 2.01
XRN1Q8IZH2 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC27.61■■■□□ 2.01
XRN1Q8IZH2 AL450487.1-201ENST00000426799 995 ntBASIC27.61■■■□□ 2.01
XRN1Q8IZH2 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC27.61■■■□□ 2.01
XRN1Q8IZH2 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC27.61■■■□□ 2.01
XRN1Q8IZH2 AL441883.1-201ENST00000566170 1045 ntBASIC27.61■■■□□ 2.01
XRN1Q8IZH2 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC27.61■■■□□ 2.01
XRN1Q8IZH2 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC27.61■■■□□ 2.01
XRN1Q8IZH2 AC093458.2-201ENST00000623150 629 ntBASIC27.61■■■□□ 2.01
XRN1Q8IZH2 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC27.61■■■□□ 2.01
XRN1Q8IZH2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC27.61■■■□□ 2.01
XRN1Q8IZH2 DPP3P2-201ENST00000416030 1696 ntBASIC27.6■■■□□ 2.01
XRN1Q8IZH2 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
XRN1Q8IZH2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
XRN1Q8IZH2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
XRN1Q8IZH2 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC27.6■■■□□ 2.01
XRN1Q8IZH2 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC27.6■■■□□ 2.01
XRN1Q8IZH2 KRT18P38-201ENST00000449496 1282 ntBASIC27.6■■■□□ 2.01
XRN1Q8IZH2 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC27.6■■■□□ 2.01
XRN1Q8IZH2 GLRB-205ENST00000512619 728 ntTSL 3 BASIC27.6■■■□□ 2.01
XRN1Q8IZH2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC27.6■■■□□ 2.01
XRN1Q8IZH2 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC27.6■■■□□ 2.01
XRN1Q8IZH2 AC130371.2-201ENST00000619443 611 ntBASIC27.6■■■□□ 2.01
XRN1Q8IZH2 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC27.6■■■□□ 2.01
XRN1Q8IZH2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
XRN1Q8IZH2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
XRN1Q8IZH2 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC27.59■■■□□ 2.01
XRN1Q8IZH2 TPM4P1-201ENST00000436100 807 ntBASIC27.59■■■□□ 2.01
XRN1Q8IZH2 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC27.59■■■□□ 2.01
XRN1Q8IZH2 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC27.59■■■□□ 2.01
XRN1Q8IZH2 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC27.59■■■□□ 2.01
XRN1Q8IZH2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
XRN1Q8IZH2 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC27.59■■■□□ 2.01
XRN1Q8IZH2 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
XRN1Q8IZH2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC27.58■■■□□ 2.01
XRN1Q8IZH2 AL023973.1-201ENST00000624619 620 ntBASIC27.58■■■□□ 2.01
XRN1Q8IZH2 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
XRN1Q8IZH2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
XRN1Q8IZH2 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2.01
XRN1Q8IZH2 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC27.58■■■□□ 2.01
XRN1Q8IZH2 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
XRN1Q8IZH2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
XRN1Q8IZH2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
XRN1Q8IZH2 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC27.58■■■□□ 2.01
XRN1Q8IZH2 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC27.58■■■□□ 2.01
XRN1Q8IZH2 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC27.58■■■□□ 2.01
XRN1Q8IZH2 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC27.58■■■□□ 2.01
XRN1Q8IZH2 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC27.58■■■□□ 2.01
XRN1Q8IZH2 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC27.58■■■□□ 2.01
XRN1Q8IZH2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
XRN1Q8IZH2 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC27.57■■■□□ 2
XRN1Q8IZH2 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC27.57■■■□□ 2
XRN1Q8IZH2 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC27.57■■■□□ 2
XRN1Q8IZH2 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC27.57■■■□□ 2
XRN1Q8IZH2 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC27.57■■■□□ 2
XRN1Q8IZH2 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
XRN1Q8IZH2 AC011558.1-201ENST00000623459 338 ntBASIC27.57■■■□□ 2
XRN1Q8IZH2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC27.57■■■□□ 2
XRN1Q8IZH2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC27.57■■■□□ 2
XRN1Q8IZH2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
XRN1Q8IZH2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC27.57■■■□□ 2
XRN1Q8IZH2 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC27.56■■■□□ 2
XRN1Q8IZH2 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
XRN1Q8IZH2 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
XRN1Q8IZH2 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
XRN1Q8IZH2 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC27.56■■■□□ 2
XRN1Q8IZH2 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC27.56■■■□□ 2
XRN1Q8IZH2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC27.56■■■□□ 2
XRN1Q8IZH2 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC27.56■■■□□ 2
XRN1Q8IZH2 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC27.56■■■□□ 2
XRN1Q8IZH2 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC27.56■■■□□ 2
XRN1Q8IZH2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC27.56■■■□□ 2
XRN1Q8IZH2 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC27.56■■■□□ 2
XRN1Q8IZH2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC27.56■■■□□ 2
XRN1Q8IZH2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC27.56■■■□□ 2
XRN1Q8IZH2 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC27.56■■■□□ 2
XRN1Q8IZH2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC27.56■■■□□ 2
XRN1Q8IZH2 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
XRN1Q8IZH2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
XRN1Q8IZH2 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms