Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC24.51■■□□□ 1.51
DDX60Q8IY21 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC24.51■■□□□ 1.51
DDX60Q8IY21 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC24.51■■□□□ 1.51
DDX60Q8IY21 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC24.51■■□□□ 1.51
DDX60Q8IY21 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC24.51■■□□□ 1.51
DDX60Q8IY21 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
DDX60Q8IY21 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC24.51■■□□□ 1.51
DDX60Q8IY21 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
DDX60Q8IY21 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
DDX60Q8IY21 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
DDX60Q8IY21 ME2-216ENST00000639850 2331 ntTSL 5 BASIC24.51■■□□□ 1.51
DDX60Q8IY21 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC24.51■■□□□ 1.51
DDX60Q8IY21 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
DDX60Q8IY21 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
DDX60Q8IY21 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
DDX60Q8IY21 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
DDX60Q8IY21 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
DDX60Q8IY21 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
DDX60Q8IY21 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
DDX60Q8IY21 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
DDX60Q8IY21 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC24.5■■□□□ 1.51
DDX60Q8IY21 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
DDX60Q8IY21 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC24.5■■□□□ 1.51
DDX60Q8IY21 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
DDX60Q8IY21 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
DDX60Q8IY21 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
DDX60Q8IY21 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
DDX60Q8IY21 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC24.49■■□□□ 1.51
DDX60Q8IY21 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC24.49■■□□□ 1.51
DDX60Q8IY21 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC24.49■■□□□ 1.51
DDX60Q8IY21 HLA-A-209ENST00000638375 975 ntBASIC24.49■■□□□ 1.51
DDX60Q8IY21 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
DDX60Q8IY21 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
DDX60Q8IY21 TMEM179-206ENST00000616017 1645 ntBASIC24.49■■□□□ 1.51
DDX60Q8IY21 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
DDX60Q8IY21 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
DDX60Q8IY21 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
DDX60Q8IY21 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC24.49■■□□□ 1.51
DDX60Q8IY21 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC24.49■■□□□ 1.51
DDX60Q8IY21 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
DDX60Q8IY21 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
DDX60Q8IY21 AP005242.2-201ENST00000580065 1175 ntBASIC24.49■■□□□ 1.51
DDX60Q8IY21 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
DDX60Q8IY21 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
DDX60Q8IY21 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
DDX60Q8IY21 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
DDX60Q8IY21 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
DDX60Q8IY21 AL137060.1-201ENST00000618151 2648 ntBASIC24.48■■□□□ 1.51
DDX60Q8IY21 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
DDX60Q8IY21 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
DDX60Q8IY21 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC24.48■■□□□ 1.51
DDX60Q8IY21 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC24.48■■□□□ 1.51
DDX60Q8IY21 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC24.48■■□□□ 1.51
DDX60Q8IY21 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC24.48■■□□□ 1.51
DDX60Q8IY21 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
DDX60Q8IY21 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC24.48■■□□□ 1.51
DDX60Q8IY21 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC24.48■■□□□ 1.51
DDX60Q8IY21 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
DDX60Q8IY21 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC24.47■■□□□ 1.51
DDX60Q8IY21 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC24.47■■□□□ 1.51
DDX60Q8IY21 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
DDX60Q8IY21 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
DDX60Q8IY21 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
DDX60Q8IY21 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
DDX60Q8IY21 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
DDX60Q8IY21 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC24.47■■□□□ 1.51
DDX60Q8IY21 FDX2-206ENST00000492239 773 ntTSL 2 BASIC24.47■■□□□ 1.51
DDX60Q8IY21 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC24.47■■□□□ 1.51
DDX60Q8IY21 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
DDX60Q8IY21 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC24.47■■□□□ 1.51
DDX60Q8IY21 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
DDX60Q8IY21 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
DDX60Q8IY21 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
DDX60Q8IY21 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
DDX60Q8IY21 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC24.47■■□□□ 1.51
DDX60Q8IY21 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC24.47■■□□□ 1.51
DDX60Q8IY21 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
DDX60Q8IY21 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
DDX60Q8IY21 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC24.47■■□□□ 1.51
DDX60Q8IY21 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
DDX60Q8IY21 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
DDX60Q8IY21 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
DDX60Q8IY21 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
DDX60Q8IY21 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC24.46■■□□□ 1.51
DDX60Q8IY21 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
DDX60Q8IY21 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
DDX60Q8IY21 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
DDX60Q8IY21 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
DDX60Q8IY21 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC24.46■■□□□ 1.51
DDX60Q8IY21 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC24.46■■□□□ 1.51
DDX60Q8IY21 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC24.46■■□□□ 1.51
DDX60Q8IY21 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC24.46■■□□□ 1.51
DDX60Q8IY21 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
DDX60Q8IY21 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC24.45■■□□□ 1.51
DDX60Q8IY21 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
DDX60Q8IY21 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC24.45■■□□□ 1.5
DDX60Q8IY21 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
DDX60Q8IY21 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
DDX60Q8IY21 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
DDX60Q8IY21 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms