Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM42Q8IWZ5 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM42Q8IWZ5 AC027612.3-201ENST00000413684 1047 ntBASIC19.66■□□□□ 0.74
TRIM42Q8IWZ5 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM42Q8IWZ5 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM42Q8IWZ5 AP001160.3-201ENST00000601484 763 ntBASIC19.66■□□□□ 0.74
TRIM42Q8IWZ5 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM42Q8IWZ5 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM42Q8IWZ5 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM42Q8IWZ5 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM42Q8IWZ5 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM42Q8IWZ5 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TRIM42Q8IWZ5 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM42Q8IWZ5 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM42Q8IWZ5 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TRIM42Q8IWZ5 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM42Q8IWZ5 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM42Q8IWZ5 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM42Q8IWZ5 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM42Q8IWZ5 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TRIM42Q8IWZ5 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
TRIM42Q8IWZ5 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
TRIM42Q8IWZ5 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM42Q8IWZ5 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM42Q8IWZ5 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM42Q8IWZ5 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM42Q8IWZ5 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM42Q8IWZ5 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM42Q8IWZ5 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM42Q8IWZ5 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM42Q8IWZ5 YBX1P1-201ENST00000445822 960 ntBASIC19.65■□□□□ 0.74
TRIM42Q8IWZ5 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.65■□□□□ 0.74
TRIM42Q8IWZ5 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM42Q8IWZ5 AL356652.1-201ENST00000615962 565 ntBASIC19.65■□□□□ 0.74
TRIM42Q8IWZ5 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM42Q8IWZ5 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TRIM42Q8IWZ5 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM42Q8IWZ5 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM42Q8IWZ5 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM42Q8IWZ5 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM42Q8IWZ5 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM42Q8IWZ5 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM42Q8IWZ5 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM42Q8IWZ5 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.64■□□□□ 0.74
TRIM42Q8IWZ5 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRIM42Q8IWZ5 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRIM42Q8IWZ5 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.64■□□□□ 0.74
TRIM42Q8IWZ5 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.64■□□□□ 0.74
TRIM42Q8IWZ5 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TRIM42Q8IWZ5 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM42Q8IWZ5 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM42Q8IWZ5 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TRIM42Q8IWZ5 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM42Q8IWZ5 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM42Q8IWZ5 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.64■□□□□ 0.73
TRIM42Q8IWZ5 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.64■□□□□ 0.73
TRIM42Q8IWZ5 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM42Q8IWZ5 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM42Q8IWZ5 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.64■□□□□ 0.73
TRIM42Q8IWZ5 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TRIM42Q8IWZ5 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM42Q8IWZ5 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM42Q8IWZ5 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM42Q8IWZ5 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
TRIM42Q8IWZ5 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM42Q8IWZ5 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM42Q8IWZ5 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM42Q8IWZ5 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM42Q8IWZ5 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.64■□□□□ 0.73
TRIM42Q8IWZ5 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM42Q8IWZ5 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
TRIM42Q8IWZ5 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM42Q8IWZ5 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM42Q8IWZ5 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM42Q8IWZ5 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TRIM42Q8IWZ5 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.63■□□□□ 0.73
TRIM42Q8IWZ5 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM42Q8IWZ5 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM42Q8IWZ5 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM42Q8IWZ5 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM42Q8IWZ5 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.63■□□□□ 0.73
TRIM42Q8IWZ5 AC104187.1-201ENST00000607510 612 ntBASIC19.63■□□□□ 0.73
TRIM42Q8IWZ5 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TRIM42Q8IWZ5 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM42Q8IWZ5 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM42Q8IWZ5 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM42Q8IWZ5 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM42Q8IWZ5 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TRIM42Q8IWZ5 AL138781.2-201ENST00000617896 1843 ntBASIC19.62■□□□□ 0.73
TRIM42Q8IWZ5 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
TRIM42Q8IWZ5 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM42Q8IWZ5 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM42Q8IWZ5 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM42Q8IWZ5 KRT16P6-202ENST00000425692 1426 ntBASIC19.62■□□□□ 0.73
TRIM42Q8IWZ5 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM42Q8IWZ5 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM42Q8IWZ5 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM42Q8IWZ5 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM42Q8IWZ5 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM42Q8IWZ5 AC123595.1-201ENST00000440769 1046 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms