Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC71Q8IV32 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
CCDC71Q8IV32 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CCDC71Q8IV32 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC71Q8IV32 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
CCDC71Q8IV32 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC71Q8IV32 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC71Q8IV32 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC71Q8IV32 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CCDC71Q8IV32 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCDC71Q8IV32 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC71Q8IV32 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC71Q8IV32 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.49■□□□□ 0.55
CCDC71Q8IV32 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC71Q8IV32 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC71Q8IV32 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC71Q8IV32 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC71Q8IV32 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC71Q8IV32 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC71Q8IV32 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC71Q8IV32 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC71Q8IV32 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
CCDC71Q8IV32 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC71Q8IV32 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC71Q8IV32 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC71Q8IV32 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC71Q8IV32 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC71Q8IV32 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC71Q8IV32 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC71Q8IV32 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CCDC71Q8IV32 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CCDC71Q8IV32 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC71Q8IV32 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC71Q8IV32 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC71Q8IV32 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CCDC71Q8IV32 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC71Q8IV32 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC71Q8IV32 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC71Q8IV32 AL158047.1-201ENST00000445918 881 ntBASIC18.48■□□□□ 0.55
CCDC71Q8IV32 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.48■□□□□ 0.55
CCDC71Q8IV32 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.48■□□□□ 0.55
CCDC71Q8IV32 MIR2861-201ENST00000636310 90 ntBASIC18.48■□□□□ 0.55
CCDC71Q8IV32 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC71Q8IV32 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC71Q8IV32 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC71Q8IV32 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC71Q8IV32 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC71Q8IV32 KRT17P1-201ENST00000399211 1546 ntBASIC18.48■□□□□ 0.55
CCDC71Q8IV32 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC71Q8IV32 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC71Q8IV32 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC71Q8IV32 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC71Q8IV32 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC71Q8IV32 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC71Q8IV32 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC71Q8IV32 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC71Q8IV32 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC71Q8IV32 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
CCDC71Q8IV32 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC71Q8IV32 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC71Q8IV32 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC71Q8IV32 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC71Q8IV32 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
CCDC71Q8IV32 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC71Q8IV32 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC71Q8IV32 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC71Q8IV32 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC71Q8IV32 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC71Q8IV32 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC71Q8IV32 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CCDC71Q8IV32 AC091799.1-201ENST00000422823 811 ntBASIC18.47■□□□□ 0.55
CCDC71Q8IV32 AC128676.1-201ENST00000454392 318 ntBASIC18.47■□□□□ 0.55
CCDC71Q8IV32 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.47■□□□□ 0.55
CCDC71Q8IV32 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC71Q8IV32 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CCDC71Q8IV32 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC71Q8IV32 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC71Q8IV32 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC71Q8IV32 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC71Q8IV32 TREX1-205ENST00000625293 1783 ntBASIC18.47■□□□□ 0.55
CCDC71Q8IV32 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC71Q8IV32 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC71Q8IV32 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC71Q8IV32 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC71Q8IV32 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CCDC71Q8IV32 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC71Q8IV32 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC71Q8IV32 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CCDC71Q8IV32 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC71Q8IV32 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
CCDC71Q8IV32 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.46■□□□□ 0.55
CCDC71Q8IV32 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC71Q8IV32 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC71Q8IV32 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC71Q8IV32 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC71Q8IV32 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC71Q8IV32 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.46■□□□□ 0.55
CCDC71Q8IV32 GCSHP5-201ENST00000443090 522 ntBASIC18.46■□□□□ 0.55
CCDC71Q8IV32 AC245052.3-201ENST00000450182 901 ntBASIC18.46■□□□□ 0.55
CCDC71Q8IV32 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms