Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPAS4Q8IUM7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NPAS4Q8IUM7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
NPAS4Q8IUM7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.26■□□□□ 0.99
NPAS4Q8IUM7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NPAS4Q8IUM7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPAS4Q8IUM7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NPAS4Q8IUM7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
NPAS4Q8IUM7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NPAS4Q8IUM7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NPAS4Q8IUM7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NPAS4Q8IUM7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.25■□□□□ 0.99
NPAS4Q8IUM7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NPAS4Q8IUM7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.25■□□□□ 0.99
NPAS4Q8IUM7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.25■□□□□ 0.99
NPAS4Q8IUM7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NPAS4Q8IUM7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
NPAS4Q8IUM7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.25■□□□□ 0.99
NPAS4Q8IUM7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NPAS4Q8IUM7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
NPAS4Q8IUM7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NPAS4Q8IUM7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
NPAS4Q8IUM7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.24■□□□□ 0.99
NPAS4Q8IUM7 RCC2P6-201ENST00000526625 1557 ntBASIC21.24■□□□□ 0.99
NPAS4Q8IUM7 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NPAS4Q8IUM7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.24■□□□□ 0.99
NPAS4Q8IUM7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NPAS4Q8IUM7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.24■□□□□ 0.99
NPAS4Q8IUM7 SLC25A1P4-201ENST00000567977 778 ntBASIC21.24■□□□□ 0.99
NPAS4Q8IUM7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
NPAS4Q8IUM7 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
NPAS4Q8IUM7 AC006011.2-201ENST00000621313 1158 ntBASIC21.24■□□□□ 0.99
NPAS4Q8IUM7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NPAS4Q8IUM7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.24■□□□□ 0.99
NPAS4Q8IUM7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.24■□□□□ 0.99
NPAS4Q8IUM7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.24■□□□□ 0.99
NPAS4Q8IUM7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
NPAS4Q8IUM7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NPAS4Q8IUM7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.23■□□□□ 0.99
NPAS4Q8IUM7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.23■□□□□ 0.99
NPAS4Q8IUM7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NPAS4Q8IUM7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NPAS4Q8IUM7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.23■□□□□ 0.99
NPAS4Q8IUM7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NPAS4Q8IUM7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
NPAS4Q8IUM7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
NPAS4Q8IUM7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
NPAS4Q8IUM7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NPAS4Q8IUM7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NPAS4Q8IUM7 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.23■□□□□ 0.99
NPAS4Q8IUM7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.23■□□□□ 0.99
NPAS4Q8IUM7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.23■□□□□ 0.99
NPAS4Q8IUM7 FAM87A-204ENST00000613235 858 ntBASIC21.23■□□□□ 0.99
NPAS4Q8IUM7 AC011298.2-201ENST00000617989 482 ntBASIC21.23■□□□□ 0.99
NPAS4Q8IUM7 HLA-A-209ENST00000638375 975 ntBASIC21.23■□□□□ 0.99
NPAS4Q8IUM7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NPAS4Q8IUM7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NPAS4Q8IUM7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NPAS4Q8IUM7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NPAS4Q8IUM7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NPAS4Q8IUM7 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NPAS4Q8IUM7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NPAS4Q8IUM7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NPAS4Q8IUM7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NPAS4Q8IUM7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NPAS4Q8IUM7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
NPAS4Q8IUM7 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NPAS4Q8IUM7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NPAS4Q8IUM7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NPAS4Q8IUM7 AC004951.3-201ENST00000418645 1148 ntBASIC21.22■□□□□ 0.99
NPAS4Q8IUM7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
NPAS4Q8IUM7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.22■□□□□ 0.99
NPAS4Q8IUM7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.22■□□□□ 0.99
NPAS4Q8IUM7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.22■□□□□ 0.99
NPAS4Q8IUM7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.22■□□□□ 0.99
NPAS4Q8IUM7 AC087388.1-201ENST00000571370 1112 ntBASIC21.22■□□□□ 0.99
NPAS4Q8IUM7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.22■□□□□ 0.99
NPAS4Q8IUM7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NPAS4Q8IUM7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.22■□□□□ 0.99
NPAS4Q8IUM7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NPAS4Q8IUM7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
NPAS4Q8IUM7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
NPAS4Q8IUM7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.22■□□□□ 0.99
NPAS4Q8IUM7 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NPAS4Q8IUM7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NPAS4Q8IUM7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NPAS4Q8IUM7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NPAS4Q8IUM7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NPAS4Q8IUM7 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NPAS4Q8IUM7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.21■□□□□ 0.99
NPAS4Q8IUM7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NPAS4Q8IUM7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
NPAS4Q8IUM7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NPAS4Q8IUM7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.21■□□□□ 0.99
NPAS4Q8IUM7 WWOX-216ENST00000569818 525 ntBASIC21.21■□□□□ 0.99
NPAS4Q8IUM7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NPAS4Q8IUM7 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.21■□□□□ 0.99
NPAS4Q8IUM7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
NPAS4Q8IUM7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NPAS4Q8IUM7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms