Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VRK2Q86Y07 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VRK2Q86Y07 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VRK2Q86Y07 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.26■□□□□ 0.51
VRK2Q86Y07 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VRK2Q86Y07 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VRK2Q86Y07 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.26■□□□□ 0.51
VRK2Q86Y07 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VRK2Q86Y07 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
VRK2Q86Y07 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
VRK2Q86Y07 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.25■□□□□ 0.51
VRK2Q86Y07 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VRK2Q86Y07 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VRK2Q86Y07 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.25■□□□□ 0.51
VRK2Q86Y07 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VRK2Q86Y07 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VRK2Q86Y07 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VRK2Q86Y07 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VRK2Q86Y07 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
VRK2Q86Y07 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VRK2Q86Y07 MIPEPP3-201ENST00000412105 444 ntBASIC18.25■□□□□ 0.51
VRK2Q86Y07 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.25■□□□□ 0.51
VRK2Q86Y07 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VRK2Q86Y07 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.25■□□□□ 0.51
VRK2Q86Y07 AL121832.2-201ENST00000610979 668 ntBASIC18.25■□□□□ 0.51
VRK2Q86Y07 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VRK2Q86Y07 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VRK2Q86Y07 AC087289.5-201ENST00000586076 3175 ntBASIC18.25■□□□□ 0.51
VRK2Q86Y07 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.25■□□□□ 0.51
VRK2Q86Y07 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VRK2Q86Y07 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
VRK2Q86Y07 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
VRK2Q86Y07 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VRK2Q86Y07 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VRK2Q86Y07 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VRK2Q86Y07 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VRK2Q86Y07 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
VRK2Q86Y07 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
VRK2Q86Y07 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.24■□□□□ 0.51
VRK2Q86Y07 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VRK2Q86Y07 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VRK2Q86Y07 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VRK2Q86Y07 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VRK2Q86Y07 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VRK2Q86Y07 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
VRK2Q86Y07 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
VRK2Q86Y07 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
VRK2Q86Y07 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.24■□□□□ 0.51
VRK2Q86Y07 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
VRK2Q86Y07 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
VRK2Q86Y07 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
VRK2Q86Y07 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VRK2Q86Y07 AC005332.7-201ENST00000614046 2005 ntBASIC18.23■□□□□ 0.51
VRK2Q86Y07 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VRK2Q86Y07 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
VRK2Q86Y07 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VRK2Q86Y07 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.23■□□□□ 0.51
VRK2Q86Y07 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.23■□□□□ 0.51
VRK2Q86Y07 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.23■□□□□ 0.51
VRK2Q86Y07 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
VRK2Q86Y07 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.23■□□□□ 0.51
VRK2Q86Y07 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
VRK2Q86Y07 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.23■□□□□ 0.51
VRK2Q86Y07 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
VRK2Q86Y07 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VRK2Q86Y07 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
VRK2Q86Y07 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.23■□□□□ 0.51
VRK2Q86Y07 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.23■□□□□ 0.51
VRK2Q86Y07 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.23■□□□□ 0.51
VRK2Q86Y07 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
VRK2Q86Y07 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.23■□□□□ 0.51
VRK2Q86Y07 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.23■□□□□ 0.51
VRK2Q86Y07 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
VRK2Q86Y07 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.23■□□□□ 0.51
VRK2Q86Y07 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.23■□□□□ 0.51
VRK2Q86Y07 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
VRK2Q86Y07 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
VRK2Q86Y07 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VRK2Q86Y07 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
VRK2Q86Y07 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
VRK2Q86Y07 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VRK2Q86Y07 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
VRK2Q86Y07 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.22■□□□□ 0.51
VRK2Q86Y07 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
VRK2Q86Y07 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VRK2Q86Y07 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VRK2Q86Y07 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
VRK2Q86Y07 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
VRK2Q86Y07 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
VRK2Q86Y07 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.22■□□□□ 0.51
VRK2Q86Y07 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VRK2Q86Y07 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VRK2Q86Y07 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VRK2Q86Y07 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VRK2Q86Y07 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.22■□□□□ 0.51
VRK2Q86Y07 DUSP5P2-201ENST00000426873 1033 ntBASIC18.22■□□□□ 0.51
VRK2Q86Y07 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.22■□□□□ 0.51
VRK2Q86Y07 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.22■□□□□ 0.51
VRK2Q86Y07 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.22■□□□□ 0.51
VRK2Q86Y07 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms