Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRC28Q86X40 AC006970.2-201ENST00000450065 779 ntBASIC17.54■□□□□ 0.4
LRRC28Q86X40 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.54■□□□□ 0.4
LRRC28Q86X40 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRC28Q86X40 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.54■□□□□ 0.4
LRRC28Q86X40 AC013268.1-206ENST00000638368 961 ntBASIC17.54■□□□□ 0.4
LRRC28Q86X40 AC112229.1-201ENST00000639295 961 ntBASIC17.54■□□□□ 0.4
LRRC28Q86X40 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC28Q86X40 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC28Q86X40 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC28Q86X40 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC28Q86X40 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
LRRC28Q86X40 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRC28Q86X40 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC28Q86X40 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRC28Q86X40 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRC28Q86X40 AL691432.2-201ENST00000607222 2038 ntBASIC17.54■□□□□ 0.4
LRRC28Q86X40 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC28Q86X40 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC28Q86X40 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
LRRC28Q86X40 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.53■□□□□ 0.4
LRRC28Q86X40 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC28Q86X40 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC28Q86X40 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC28Q86X40 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC28Q86X40 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.53■□□□□ 0.4
LRRC28Q86X40 ID1-201ENST00000376105 1233 ntBASIC17.53■□□□□ 0.4
LRRC28Q86X40 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC28Q86X40 CNN2P6-201ENST00000439038 900 ntBASIC17.53■□□□□ 0.4
LRRC28Q86X40 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.53■□□□□ 0.4
LRRC28Q86X40 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.53■□□□□ 0.4
LRRC28Q86X40 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC28Q86X40 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
LRRC28Q86X40 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC28Q86X40 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.53■□□□□ 0.4
LRRC28Q86X40 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC28Q86X40 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC28Q86X40 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC28Q86X40 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
LRRC28Q86X40 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
LRRC28Q86X40 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC28Q86X40 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC28Q86X40 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC28Q86X40 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.52■□□□□ 0.4
LRRC28Q86X40 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
LRRC28Q86X40 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC28Q86X40 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC28Q86X40 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.52■□□□□ 0.4
LRRC28Q86X40 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.52■□□□□ 0.4
LRRC28Q86X40 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.52■□□□□ 0.4
LRRC28Q86X40 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.52■□□□□ 0.4
LRRC28Q86X40 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC28Q86X40 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.52■□□□□ 0.4
LRRC28Q86X40 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.52■□□□□ 0.4
LRRC28Q86X40 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
LRRC28Q86X40 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.52■□□□□ 0.4
LRRC28Q86X40 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.52■□□□□ 0.4
LRRC28Q86X40 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
LRRC28Q86X40 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC28Q86X40 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC28Q86X40 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRRC28Q86X40 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LRRC28Q86X40 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRRC28Q86X40 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LRRC28Q86X40 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LRRC28Q86X40 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LRRC28Q86X40 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LRRC28Q86X40 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.52■□□□□ 0.39
LRRC28Q86X40 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
LRRC28Q86X40 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRRC28Q86X40 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC28Q86X40 AC120498.9-201ENST00000339021 3867 ntBASIC17.51■□□□□ 0.39
LRRC28Q86X40 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC28Q86X40 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC28Q86X40 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC28Q86X40 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC28Q86X40 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LRRC28Q86X40 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC28Q86X40 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC28Q86X40 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LRRC28Q86X40 AC007322.4-201ENST00000509611 723 ntBASIC17.51■□□□□ 0.39
LRRC28Q86X40 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.51■□□□□ 0.39
LRRC28Q86X40 AC005181.1-201ENST00000604782 1256 ntBASIC17.51■□□□□ 0.39
LRRC28Q86X40 AC243732.1-201ENST00000612648 864 ntBASIC17.51■□□□□ 0.39
LRRC28Q86X40 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.51■□□□□ 0.39
LRRC28Q86X40 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
LRRC28Q86X40 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC28Q86X40 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
LRRC28Q86X40 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.51■□□□□ 0.39
LRRC28Q86X40 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC28Q86X40 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC28Q86X40 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.51■□□□□ 0.39
LRRC28Q86X40 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC28Q86X40 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC28Q86X40 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.5■□□□□ 0.39
LRRC28Q86X40 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC28Q86X40 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC28Q86X40 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC28Q86X40 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC28Q86X40 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms