Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.41■□□□□ 0.7
LRRTM4Q86VH4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRRTM4Q86VH4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRTM4Q86VH4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.41■□□□□ 0.7
LRRTM4Q86VH4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.41■□□□□ 0.7
LRRTM4Q86VH4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRTM4Q86VH4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.41■□□□□ 0.7
LRRTM4Q86VH4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRTM4Q86VH4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRTM4Q86VH4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.41■□□□□ 0.7
LRRTM4Q86VH4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRTM4Q86VH4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.41■□□□□ 0.7
LRRTM4Q86VH4 AL691432.2-201ENST00000607222 2038 ntBASIC19.41■□□□□ 0.7
LRRTM4Q86VH4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRTM4Q86VH4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRTM4Q86VH4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRTM4Q86VH4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRTM4Q86VH4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRRTM4Q86VH4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.4■□□□□ 0.7
LRRTM4Q86VH4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.4■□□□□ 0.7
LRRTM4Q86VH4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
LRRTM4Q86VH4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.4■□□□□ 0.7
LRRTM4Q86VH4 KRT16P5-201ENST00000455284 522 ntBASIC19.4■□□□□ 0.7
LRRTM4Q86VH4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.4■□□□□ 0.7
LRRTM4Q86VH4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRRTM4Q86VH4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LRRTM4Q86VH4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRTM4Q86VH4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRTM4Q86VH4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRTM4Q86VH4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRRTM4Q86VH4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRRTM4Q86VH4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRTM4Q86VH4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRTM4Q86VH4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LRRTM4Q86VH4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.39■□□□□ 0.69
LRRTM4Q86VH4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.39■□□□□ 0.69
LRRTM4Q86VH4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRRTM4Q86VH4 AC008550.1-201ENST00000511500 884 ntBASIC19.39■□□□□ 0.69
LRRTM4Q86VH4 AC093827.2-201ENST00000512654 315 ntBASIC19.39■□□□□ 0.69
LRRTM4Q86VH4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.39■□□□□ 0.69
LRRTM4Q86VH4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.39■□□□□ 0.69
LRRTM4Q86VH4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.39■□□□□ 0.69
LRRTM4Q86VH4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.39■□□□□ 0.69
LRRTM4Q86VH4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRRTM4Q86VH4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRTM4Q86VH4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRRTM4Q86VH4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.39■□□□□ 0.69
LRRTM4Q86VH4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
LRRTM4Q86VH4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.39■□□□□ 0.69
LRRTM4Q86VH4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRRTM4Q86VH4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRTM4Q86VH4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LRRTM4Q86VH4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRTM4Q86VH4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRTM4Q86VH4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.38■□□□□ 0.69
LRRTM4Q86VH4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.38■□□□□ 0.69
LRRTM4Q86VH4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRTM4Q86VH4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRTM4Q86VH4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRTM4Q86VH4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRTM4Q86VH4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRTM4Q86VH4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRTM4Q86VH4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRTM4Q86VH4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.38■□□□□ 0.69
LRRTM4Q86VH4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.38■□□□□ 0.69
LRRTM4Q86VH4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRTM4Q86VH4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LRRTM4Q86VH4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LRRTM4Q86VH4 YBX1P10-201ENST00000444752 975 ntBASIC19.38■□□□□ 0.69
LRRTM4Q86VH4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRTM4Q86VH4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
LRRTM4Q86VH4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.38■□□□□ 0.69
LRRTM4Q86VH4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
LRRTM4Q86VH4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.38■□□□□ 0.69
LRRTM4Q86VH4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
LRRTM4Q86VH4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
LRRTM4Q86VH4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms