Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LYSMD3Q7Z3D4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.85■□□□□ 0.77
LYSMD3Q7Z3D4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LYSMD3Q7Z3D4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.85■□□□□ 0.77
LYSMD3Q7Z3D4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.85■□□□□ 0.77
LYSMD3Q7Z3D4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LYSMD3Q7Z3D4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.85■□□□□ 0.77
LYSMD3Q7Z3D4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LYSMD3Q7Z3D4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
LYSMD3Q7Z3D4 AC069544.1-201ENST00000609399 999 ntBASIC19.85■□□□□ 0.77
LYSMD3Q7Z3D4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.85■□□□□ 0.77
LYSMD3Q7Z3D4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LYSMD3Q7Z3D4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.85■□□□□ 0.77
LYSMD3Q7Z3D4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LYSMD3Q7Z3D4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LYSMD3Q7Z3D4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LYSMD3Q7Z3D4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LYSMD3Q7Z3D4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LYSMD3Q7Z3D4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.85■□□□□ 0.77
LYSMD3Q7Z3D4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.85■□□□□ 0.77
LYSMD3Q7Z3D4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LYSMD3Q7Z3D4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LYSMD3Q7Z3D4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LYSMD3Q7Z3D4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LYSMD3Q7Z3D4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LYSMD3Q7Z3D4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.84■□□□□ 0.77
LYSMD3Q7Z3D4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.84■□□□□ 0.77
LYSMD3Q7Z3D4 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.84■□□□□ 0.77
LYSMD3Q7Z3D4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LYSMD3Q7Z3D4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LYSMD3Q7Z3D4 KRT17P3-201ENST00000420566 1262 ntBASIC19.84■□□□□ 0.77
LYSMD3Q7Z3D4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.84■□□□□ 0.77
LYSMD3Q7Z3D4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
LYSMD3Q7Z3D4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.84■□□□□ 0.77
LYSMD3Q7Z3D4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
LYSMD3Q7Z3D4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.84■□□□□ 0.77
LYSMD3Q7Z3D4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LYSMD3Q7Z3D4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LYSMD3Q7Z3D4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LYSMD3Q7Z3D4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
LYSMD3Q7Z3D4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
LYSMD3Q7Z3D4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
LYSMD3Q7Z3D4 AC116351.2-201ENST00000606540 1585 ntBASIC19.83■□□□□ 0.77
LYSMD3Q7Z3D4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
LYSMD3Q7Z3D4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
LYSMD3Q7Z3D4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
LYSMD3Q7Z3D4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
LYSMD3Q7Z3D4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LYSMD3Q7Z3D4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LYSMD3Q7Z3D4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LYSMD3Q7Z3D4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LYSMD3Q7Z3D4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LYSMD3Q7Z3D4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LYSMD3Q7Z3D4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.83■□□□□ 0.77
LYSMD3Q7Z3D4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LYSMD3Q7Z3D4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LYSMD3Q7Z3D4 AL121906.2-201ENST00000621597 723 ntBASIC19.83■□□□□ 0.77
LYSMD3Q7Z3D4 AC073648.6-201ENST00000641589 218 ntBASIC19.83■□□□□ 0.77
LYSMD3Q7Z3D4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
LYSMD3Q7Z3D4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LYSMD3Q7Z3D4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.83■□□□□ 0.76
LYSMD3Q7Z3D4 AC018553.1-201ENST00000616682 1458 ntBASIC19.83■□□□□ 0.76
LYSMD3Q7Z3D4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
LYSMD3Q7Z3D4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.83■□□□□ 0.76
LYSMD3Q7Z3D4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LYSMD3Q7Z3D4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LYSMD3Q7Z3D4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LYSMD3Q7Z3D4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
LYSMD3Q7Z3D4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LYSMD3Q7Z3D4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LYSMD3Q7Z3D4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LYSMD3Q7Z3D4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LYSMD3Q7Z3D4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LYSMD3Q7Z3D4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LYSMD3Q7Z3D4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LYSMD3Q7Z3D4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.82■□□□□ 0.76
LYSMD3Q7Z3D4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LYSMD3Q7Z3D4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LYSMD3Q7Z3D4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LYSMD3Q7Z3D4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LYSMD3Q7Z3D4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LYSMD3Q7Z3D4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LYSMD3Q7Z3D4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.82■□□□□ 0.76
LYSMD3Q7Z3D4 AC128676.1-201ENST00000454392 318 ntBASIC19.82■□□□□ 0.76
LYSMD3Q7Z3D4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.82■□□□□ 0.76
LYSMD3Q7Z3D4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
LYSMD3Q7Z3D4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LYSMD3Q7Z3D4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.82■□□□□ 0.76
LYSMD3Q7Z3D4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.82■□□□□ 0.76
LYSMD3Q7Z3D4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
LYSMD3Q7Z3D4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LYSMD3Q7Z3D4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.82■□□□□ 0.76
LYSMD3Q7Z3D4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
LYSMD3Q7Z3D4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LYSMD3Q7Z3D4 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.82■□□□□ 0.76
LYSMD3Q7Z3D4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LYSMD3Q7Z3D4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LYSMD3Q7Z3D4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.81■□□□□ 0.76
LYSMD3Q7Z3D4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LYSMD3Q7Z3D4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms