Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SHFQ7M4L6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHFQ7M4L6 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.82■□□□□ 0.44
SHFQ7M4L6 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SHFQ7M4L6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHFQ7M4L6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SHFQ7M4L6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
SHFQ7M4L6 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHFQ7M4L6 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHFQ7M4L6 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SHFQ7M4L6 AC087633.2-202ENST00000565166 1439 ntBASIC17.81■□□□□ 0.44
SHFQ7M4L6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.81■□□□□ 0.44
SHFQ7M4L6 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHFQ7M4L6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SHFQ7M4L6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHFQ7M4L6 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SHFQ7M4L6 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHFQ7M4L6 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHFQ7M4L6 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.81■□□□□ 0.44
SHFQ7M4L6 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
SHFQ7M4L6 NEFHP1-201ENST00000412845 2629 ntBASIC17.81■□□□□ 0.44
SHFQ7M4L6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHFQ7M4L6 KRT18P11-201ENST00000435214 1283 ntBASIC17.81■□□□□ 0.44
SHFQ7M4L6 AC034268.1-201ENST00000441047 882 ntBASIC17.81■□□□□ 0.44
SHFQ7M4L6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.81■□□□□ 0.44
SHFQ7M4L6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.81■□□□□ 0.44
SHFQ7M4L6 AL162412.1-201ENST00000567129 965 ntBASIC17.81■□□□□ 0.44
SHFQ7M4L6 KRT18P61-201ENST00000585825 1298 ntBASIC17.81■□□□□ 0.44
SHFQ7M4L6 NTF6G-201ENST00000591094 616 ntBASIC17.81■□□□□ 0.44
SHFQ7M4L6 AC010536.3-201ENST00000620306 533 ntBASIC17.81■□□□□ 0.44
SHFQ7M4L6 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.81■□□□□ 0.44
SHFQ7M4L6 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHFQ7M4L6 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.81■□□□□ 0.44
SHFQ7M4L6 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHFQ7M4L6 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHFQ7M4L6 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHFQ7M4L6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.81■□□□□ 0.44
SHFQ7M4L6 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHFQ7M4L6 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHFQ7M4L6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
SHFQ7M4L6 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHFQ7M4L6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHFQ7M4L6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SHFQ7M4L6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SHFQ7M4L6 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHFQ7M4L6 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHFQ7M4L6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHFQ7M4L6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SHFQ7M4L6 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHFQ7M4L6 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHFQ7M4L6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHFQ7M4L6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SHFQ7M4L6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.8■□□□□ 0.44
SHFQ7M4L6 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.8■□□□□ 0.44
SHFQ7M4L6 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
SHFQ7M4L6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.8■□□□□ 0.44
SHFQ7M4L6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SHFQ7M4L6 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHFQ7M4L6 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHFQ7M4L6 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
SHFQ7M4L6 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHFQ7M4L6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.8■□□□□ 0.44
SHFQ7M4L6 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHFQ7M4L6 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.8■□□□□ 0.44
SHFQ7M4L6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHFQ7M4L6 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.8■□□□□ 0.44
SHFQ7M4L6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
SHFQ7M4L6 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHFQ7M4L6 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHFQ7M4L6 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHFQ7M4L6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHFQ7M4L6 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.79■□□□□ 0.44
SHFQ7M4L6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHFQ7M4L6 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.79■□□□□ 0.44
SHFQ7M4L6 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHFQ7M4L6 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SHFQ7M4L6 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHFQ7M4L6 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.79■□□□□ 0.44
SHFQ7M4L6 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.79■□□□□ 0.44
SHFQ7M4L6 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHFQ7M4L6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHFQ7M4L6 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHFQ7M4L6 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHFQ7M4L6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
SHFQ7M4L6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHFQ7M4L6 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHFQ7M4L6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHFQ7M4L6 AL032819.2-201ENST00000624543 2162 ntBASIC17.79■□□□□ 0.44
SHFQ7M4L6 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHFQ7M4L6 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SHFQ7M4L6 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SHFQ7M4L6 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHFQ7M4L6 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.78■□□□□ 0.44
SHFQ7M4L6 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHFQ7M4L6 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.78■□□□□ 0.44
SHFQ7M4L6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SHFQ7M4L6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
SHFQ7M4L6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.78■□□□□ 0.44
SHFQ7M4L6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.78■□□□□ 0.44
SHFQ7M4L6 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms