Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC149Q6ZUS6 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC149Q6ZUS6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CCDC149Q6ZUS6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC149Q6ZUS6 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC149Q6ZUS6 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.8■□□□□ 0.92
CCDC149Q6ZUS6 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC149Q6ZUS6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC149Q6ZUS6 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CCDC149Q6ZUS6 AC026271.3-201ENST00000571884 352 ntBASIC20.8■□□□□ 0.92
CCDC149Q6ZUS6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.8■□□□□ 0.92
CCDC149Q6ZUS6 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC149Q6ZUS6 AL445675.2-201ENST00000620291 557 ntBASIC20.8■□□□□ 0.92
CCDC149Q6ZUS6 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC149Q6ZUS6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC149Q6ZUS6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CCDC149Q6ZUS6 AC018553.1-201ENST00000616682 1458 ntBASIC20.8■□□□□ 0.92
CCDC149Q6ZUS6 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC149Q6ZUS6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC149Q6ZUS6 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC149Q6ZUS6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC149Q6ZUS6 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC149Q6ZUS6 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC149Q6ZUS6 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC149Q6ZUS6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
CCDC149Q6ZUS6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC149Q6ZUS6 TUBB8P6-201ENST00000436895 1288 ntBASIC20.79■□□□□ 0.92
CCDC149Q6ZUS6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC149Q6ZUS6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC149Q6ZUS6 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC149Q6ZUS6 NTF6B-201ENST00000591913 560 ntBASIC20.79■□□□□ 0.92
CCDC149Q6ZUS6 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC149Q6ZUS6 FSCN1P1-201ENST00000568912 1481 ntBASIC20.79■□□□□ 0.92
CCDC149Q6ZUS6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC149Q6ZUS6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC149Q6ZUS6 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC149Q6ZUS6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CCDC149Q6ZUS6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC149Q6ZUS6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC149Q6ZUS6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC149Q6ZUS6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC149Q6ZUS6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC149Q6ZUS6 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC149Q6ZUS6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC149Q6ZUS6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC149Q6ZUS6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CCDC149Q6ZUS6 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC149Q6ZUS6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.78■□□□□ 0.92
CCDC149Q6ZUS6 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC149Q6ZUS6 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC149Q6ZUS6 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
CCDC149Q6ZUS6 KRT18P16-201ENST00000510337 1294 ntBASIC20.78■□□□□ 0.92
CCDC149Q6ZUS6 AC087388.1-201ENST00000571370 1112 ntBASIC20.78■□□□□ 0.92
CCDC149Q6ZUS6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC149Q6ZUS6 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC149Q6ZUS6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC149Q6ZUS6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC149Q6ZUS6 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC149Q6ZUS6 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC149Q6ZUS6 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC149Q6ZUS6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC149Q6ZUS6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC149Q6ZUS6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC149Q6ZUS6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC149Q6ZUS6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC149Q6ZUS6 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC149Q6ZUS6 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC149Q6ZUS6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC149Q6ZUS6 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.77■□□□□ 0.92
CCDC149Q6ZUS6 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC149Q6ZUS6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CCDC149Q6ZUS6 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.77■□□□□ 0.92
CCDC149Q6ZUS6 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
CCDC149Q6ZUS6 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
CCDC149Q6ZUS6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC149Q6ZUS6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC149Q6ZUS6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CCDC149Q6ZUS6 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
CCDC149Q6ZUS6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CCDC149Q6ZUS6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC149Q6ZUS6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC149Q6ZUS6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC149Q6ZUS6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC149Q6ZUS6 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
CCDC149Q6ZUS6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC149Q6ZUS6 PHGDH-210ENST00000641115 1638 ntBASIC20.76■□□□□ 0.91
CCDC149Q6ZUS6 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC149Q6ZUS6 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC149Q6ZUS6 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC149Q6ZUS6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CCDC149Q6ZUS6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CCDC149Q6ZUS6 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC149Q6ZUS6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC149Q6ZUS6 LIN28AP1-201ENST00000429574 405 ntBASIC20.76■□□□□ 0.91
CCDC149Q6ZUS6 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.76■□□□□ 0.91
CCDC149Q6ZUS6 ATP5G1P1-201ENST00000448724 379 ntBASIC20.76■□□□□ 0.91
CCDC149Q6ZUS6 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
CCDC149Q6ZUS6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC149Q6ZUS6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC149Q6ZUS6 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms