Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
DCLRE1AQ6PJP8 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DCLRE1AQ6PJP8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.14■□□□□ 0.97
DCLRE1AQ6PJP8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DCLRE1AQ6PJP8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DCLRE1AQ6PJP8 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
DCLRE1AQ6PJP8 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
DCLRE1AQ6PJP8 KRT18P16-201ENST00000510337 1294 ntBASIC21.14■□□□□ 0.97
DCLRE1AQ6PJP8 NUDT16P1-203ENST00000513809 620 ntBASIC21.14■□□□□ 0.97
DCLRE1AQ6PJP8 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.14■□□□□ 0.97
DCLRE1AQ6PJP8 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.14■□□□□ 0.97
DCLRE1AQ6PJP8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.14■□□□□ 0.97
DCLRE1AQ6PJP8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DCLRE1AQ6PJP8 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DCLRE1AQ6PJP8 BX119927.1-201ENST00000636596 1552 ntBASIC21.14■□□□□ 0.97
DCLRE1AQ6PJP8 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
DCLRE1AQ6PJP8 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
DCLRE1AQ6PJP8 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DCLRE1AQ6PJP8 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DCLRE1AQ6PJP8 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DCLRE1AQ6PJP8 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.13■□□□□ 0.97
DCLRE1AQ6PJP8 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
DCLRE1AQ6PJP8 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DCLRE1AQ6PJP8 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
DCLRE1AQ6PJP8 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.13■□□□□ 0.97
DCLRE1AQ6PJP8 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
DCLRE1AQ6PJP8 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DCLRE1AQ6PJP8 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
DCLRE1AQ6PJP8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.13■□□□□ 0.97
DCLRE1AQ6PJP8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.13■□□□□ 0.97
DCLRE1AQ6PJP8 CR392000.1-201ENST00000624770 1228 ntBASIC21.13■□□□□ 0.97
DCLRE1AQ6PJP8 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.13■□□□□ 0.97
DCLRE1AQ6PJP8 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
DCLRE1AQ6PJP8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
DCLRE1AQ6PJP8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
DCLRE1AQ6PJP8 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DCLRE1AQ6PJP8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DCLRE1AQ6PJP8 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.12■□□□□ 0.97
DCLRE1AQ6PJP8 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DCLRE1AQ6PJP8 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.12■□□□□ 0.97
DCLRE1AQ6PJP8 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.12■□□□□ 0.97
DCLRE1AQ6PJP8 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DCLRE1AQ6PJP8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
DCLRE1AQ6PJP8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.12■□□□□ 0.97
DCLRE1AQ6PJP8 TUBB8P6-201ENST00000436895 1288 ntBASIC21.12■□□□□ 0.97
DCLRE1AQ6PJP8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.12■□□□□ 0.97
DCLRE1AQ6PJP8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.12■□□□□ 0.97
DCLRE1AQ6PJP8 C1QL1P1-201ENST00000568105 661 ntBASIC21.12■□□□□ 0.97
DCLRE1AQ6PJP8 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DCLRE1AQ6PJP8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
DCLRE1AQ6PJP8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DCLRE1AQ6PJP8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
DCLRE1AQ6PJP8 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.12■□□□□ 0.97
DCLRE1AQ6PJP8 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DCLRE1AQ6PJP8 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DCLRE1AQ6PJP8 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
DCLRE1AQ6PJP8 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
DCLRE1AQ6PJP8 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DCLRE1AQ6PJP8 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DCLRE1AQ6PJP8 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.11■□□□□ 0.97
DCLRE1AQ6PJP8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DCLRE1AQ6PJP8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
DCLRE1AQ6PJP8 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.11■□□□□ 0.97
DCLRE1AQ6PJP8 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.11■□□□□ 0.97
DCLRE1AQ6PJP8 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DCLRE1AQ6PJP8 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
DCLRE1AQ6PJP8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.11■□□□□ 0.97
DCLRE1AQ6PJP8 AC087499.1-201ENST00000418141 1075 ntBASIC21.11■□□□□ 0.97
DCLRE1AQ6PJP8 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DCLRE1AQ6PJP8 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.11■□□□□ 0.97
DCLRE1AQ6PJP8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DCLRE1AQ6PJP8 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.11■□□□□ 0.97
DCLRE1AQ6PJP8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
DCLRE1AQ6PJP8 KRT16P1-201ENST00000399124 1418 ntBASIC21.11■□□□□ 0.97
DCLRE1AQ6PJP8 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DCLRE1AQ6PJP8 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DCLRE1AQ6PJP8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.11■□□□□ 0.97
DCLRE1AQ6PJP8 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.11■□□□□ 0.97
DCLRE1AQ6PJP8 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
DCLRE1AQ6PJP8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
DCLRE1AQ6PJP8 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DCLRE1AQ6PJP8 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.1■□□□□ 0.97
DCLRE1AQ6PJP8 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.1■□□□□ 0.97
DCLRE1AQ6PJP8 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.1■□□□□ 0.97
DCLRE1AQ6PJP8 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.1■□□□□ 0.97
DCLRE1AQ6PJP8 REXO1L10P-201ENST00000615707 1290 ntBASIC21.1■□□□□ 0.97
DCLRE1AQ6PJP8 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
DCLRE1AQ6PJP8 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DCLRE1AQ6PJP8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DCLRE1AQ6PJP8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DCLRE1AQ6PJP8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DCLRE1AQ6PJP8 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DCLRE1AQ6PJP8 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DCLRE1AQ6PJP8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DCLRE1AQ6PJP8 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DCLRE1AQ6PJP8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
DCLRE1AQ6PJP8 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DCLRE1AQ6PJP8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.09■□□□□ 0.97
DCLRE1AQ6PJP8 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.09■□□□□ 0.97
DCLRE1AQ6PJP8 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms