Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFWD3Q6PCD5 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFWD3Q6PCD5 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFWD3Q6PCD5 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
RFWD3Q6PCD5 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFWD3Q6PCD5 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFWD3Q6PCD5 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.59■□□□□ 0.89
RFWD3Q6PCD5 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.59■□□□□ 0.89
RFWD3Q6PCD5 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.58■□□□□ 0.89
RFWD3Q6PCD5 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFWD3Q6PCD5 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
RFWD3Q6PCD5 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
RFWD3Q6PCD5 AP005212.1-201ENST00000581547 1997 ntBASIC20.58■□□□□ 0.89
RFWD3Q6PCD5 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFWD3Q6PCD5 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFWD3Q6PCD5 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
RFWD3Q6PCD5 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFWD3Q6PCD5 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFWD3Q6PCD5 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
RFWD3Q6PCD5 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.58■□□□□ 0.89
RFWD3Q6PCD5 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
RFWD3Q6PCD5 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.58■□□□□ 0.89
RFWD3Q6PCD5 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
RFWD3Q6PCD5 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.58■□□□□ 0.89
RFWD3Q6PCD5 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
RFWD3Q6PCD5 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.58■□□□□ 0.89
RFWD3Q6PCD5 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RFWD3Q6PCD5 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
RFWD3Q6PCD5 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
RFWD3Q6PCD5 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
RFWD3Q6PCD5 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFWD3Q6PCD5 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
RFWD3Q6PCD5 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RFWD3Q6PCD5 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFWD3Q6PCD5 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
RFWD3Q6PCD5 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFWD3Q6PCD5 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RFWD3Q6PCD5 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFWD3Q6PCD5 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFWD3Q6PCD5 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFWD3Q6PCD5 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFWD3Q6PCD5 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFWD3Q6PCD5 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RFWD3Q6PCD5 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFWD3Q6PCD5 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.57■□□□□ 0.88
RFWD3Q6PCD5 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.57■□□□□ 0.88
RFWD3Q6PCD5 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.57■□□□□ 0.88
RFWD3Q6PCD5 AC093827.2-201ENST00000512654 315 ntBASIC20.57■□□□□ 0.88
RFWD3Q6PCD5 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.57■□□□□ 0.88
RFWD3Q6PCD5 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.57■□□□□ 0.88
RFWD3Q6PCD5 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.57■□□□□ 0.88
RFWD3Q6PCD5 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.57■□□□□ 0.88
RFWD3Q6PCD5 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.57■□□□□ 0.88
RFWD3Q6PCD5 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.57■□□□□ 0.88
RFWD3Q6PCD5 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RFWD3Q6PCD5 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
RFWD3Q6PCD5 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFWD3Q6PCD5 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.57■□□□□ 0.88
RFWD3Q6PCD5 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFWD3Q6PCD5 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.57■□□□□ 0.88
RFWD3Q6PCD5 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RFWD3Q6PCD5 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFWD3Q6PCD5 AL020996.1-203ENST00000536896 2307 ntBASIC20.56■□□□□ 0.88
RFWD3Q6PCD5 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFWD3Q6PCD5 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.56■□□□□ 0.88
RFWD3Q6PCD5 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
RFWD3Q6PCD5 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
RFWD3Q6PCD5 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFWD3Q6PCD5 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RFWD3Q6PCD5 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFWD3Q6PCD5 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.56■□□□□ 0.88
RFWD3Q6PCD5 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.56■□□□□ 0.88
RFWD3Q6PCD5 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
RFWD3Q6PCD5 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.56■□□□□ 0.88
RFWD3Q6PCD5 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFWD3Q6PCD5 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.56■□□□□ 0.88
RFWD3Q6PCD5 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFWD3Q6PCD5 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFWD3Q6PCD5 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.56■□□□□ 0.88
RFWD3Q6PCD5 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RFWD3Q6PCD5 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RFWD3Q6PCD5 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.56■□□□□ 0.88
RFWD3Q6PCD5 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.56■□□□□ 0.88
RFWD3Q6PCD5 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFWD3Q6PCD5 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RFWD3Q6PCD5 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
RFWD3Q6PCD5 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RFWD3Q6PCD5 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RFWD3Q6PCD5 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RFWD3Q6PCD5 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.55■□□□□ 0.88
RFWD3Q6PCD5 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RFWD3Q6PCD5 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFWD3Q6PCD5 AL512408.1-201ENST00000569378 2000 ntBASIC20.55■□□□□ 0.88
RFWD3Q6PCD5 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.55■□□□□ 0.88
RFWD3Q6PCD5 AC239809.2-201ENST00000415381 517 ntBASIC20.55■□□□□ 0.88
RFWD3Q6PCD5 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.55■□□□□ 0.88
RFWD3Q6PCD5 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RFWD3Q6PCD5 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.55■□□□□ 0.88
RFWD3Q6PCD5 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.55■□□□□ 0.88
RFWD3Q6PCD5 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms