Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MRPL54Q6P161 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
MRPL54Q6P161 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MRPL54Q6P161 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
MRPL54Q6P161 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MRPL54Q6P161 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MRPL54Q6P161 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
MRPL54Q6P161 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MRPL54Q6P161 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
MRPL54Q6P161 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MRPL54Q6P161 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC14.92□□□□□ -0.02
MRPL54Q6P161 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
MRPL54Q6P161 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
MRPL54Q6P161 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MRPL54Q6P161 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
MRPL54Q6P161 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
MRPL54Q6P161 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC14.91□□□□□ -0.02
MRPL54Q6P161 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC14.91□□□□□ -0.02
MRPL54Q6P161 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MRPL54Q6P161 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MRPL54Q6P161 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.91□□□□□ -0.02
MRPL54Q6P161 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MRPL54Q6P161 LSM4-201ENST00000252816 986 ntTSL 2 BASIC14.91□□□□□ -0.02
MRPL54Q6P161 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MRPL54Q6P161 TP73-202ENST00000354437 2140 ntTSL 5 BASIC14.91□□□□□ -0.02
MRPL54Q6P161 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC14.91□□□□□ -0.02
MRPL54Q6P161 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MRPL54Q6P161 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.91□□□□□ -0.02
MRPL54Q6P161 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC14.91□□□□□ -0.02
MRPL54Q6P161 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
MRPL54Q6P161 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MRPL54Q6P161 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
MRPL54Q6P161 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
MRPL54Q6P161 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC14.91□□□□□ -0.02
MRPL54Q6P161 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
MRPL54Q6P161 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.91□□□□□ -0.02
MRPL54Q6P161 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
MRPL54Q6P161 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
MRPL54Q6P161 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MRPL54Q6P161 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
MRPL54Q6P161 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.9□□□□□ -0.02
MRPL54Q6P161 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MRPL54Q6P161 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MRPL54Q6P161 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MRPL54Q6P161 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.9□□□□□ -0.02
MRPL54Q6P161 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.9□□□□□ -0.02
MRPL54Q6P161 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MRPL54Q6P161 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC14.9□□□□□ -0.02
MRPL54Q6P161 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
MRPL54Q6P161 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
MRPL54Q6P161 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
MRPL54Q6P161 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
MRPL54Q6P161 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC14.9□□□□□ -0.02
MRPL54Q6P161 MIR2861-201ENST00000636310 90 ntBASIC14.9□□□□□ -0.02
MRPL54Q6P161 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
MRPL54Q6P161 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
MRPL54Q6P161 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MRPL54Q6P161 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MRPL54Q6P161 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MRPL54Q6P161 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MRPL54Q6P161 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MRPL54Q6P161 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC14.9□□□□□ -0.02
MRPL54Q6P161 ASL-203ENST00000380839 1765 ntTSL 5 BASIC14.9□□□□□ -0.02
MRPL54Q6P161 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
MRPL54Q6P161 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
MRPL54Q6P161 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
MRPL54Q6P161 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
MRPL54Q6P161 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MRPL54Q6P161 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
MRPL54Q6P161 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MRPL54Q6P161 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MRPL54Q6P161 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MRPL54Q6P161 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MRPL54Q6P161 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
MRPL54Q6P161 AP004607.4-201ENST00000530158 1459 ntBASIC14.89□□□□□ -0.03
MRPL54Q6P161 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MRPL54Q6P161 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
MRPL54Q6P161 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC14.89□□□□□ -0.03
MRPL54Q6P161 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MRPL54Q6P161 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MRPL54Q6P161 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MRPL54Q6P161 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC14.89□□□□□ -0.03
MRPL54Q6P161 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
MRPL54Q6P161 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC14.89□□□□□ -0.03
MRPL54Q6P161 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MRPL54Q6P161 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
MRPL54Q6P161 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
MRPL54Q6P161 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC14.89□□□□□ -0.03
MRPL54Q6P161 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MRPL54Q6P161 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MRPL54Q6P161 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
MRPL54Q6P161 TSPY9P-201ENST00000440215 945 ntBASIC14.89□□□□□ -0.03
MRPL54Q6P161 TSPY11P-201ENST00000442607 1045 ntBASIC14.89□□□□□ -0.03
MRPL54Q6P161 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC14.89□□□□□ -0.03
MRPL54Q6P161 AP005435.1-201ENST00000529293 1178 ntBASIC14.89□□□□□ -0.03
MRPL54Q6P161 ABHD17AP5-201ENST00000580133 923 ntBASIC14.89□□□□□ -0.03
MRPL54Q6P161 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
MRPL54Q6P161 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.89□□□□□ -0.03
MRPL54Q6P161 CROCCP3-202ENST00000420820 1947 ntBASIC14.89□□□□□ -0.03
MRPL54Q6P161 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms