Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTCRAQ6ISU1 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.46■□□□□ 0.87
PTCRAQ6ISU1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTCRAQ6ISU1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
PTCRAQ6ISU1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
PTCRAQ6ISU1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.45■□□□□ 0.87
PTCRAQ6ISU1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.45■□□□□ 0.86
PTCRAQ6ISU1 KRT8P17-201ENST00000453110 1448 ntBASIC20.45■□□□□ 0.86
PTCRAQ6ISU1 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PTCRAQ6ISU1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.45■□□□□ 0.86
PTCRAQ6ISU1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTCRAQ6ISU1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.45■□□□□ 0.86
PTCRAQ6ISU1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTCRAQ6ISU1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTCRAQ6ISU1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.45■□□□□ 0.86
PTCRAQ6ISU1 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTCRAQ6ISU1 AL845331.1-201ENST00000424978 1190 ntBASIC20.45■□□□□ 0.86
PTCRAQ6ISU1 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.45■□□□□ 0.86
PTCRAQ6ISU1 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.45■□□□□ 0.86
PTCRAQ6ISU1 AC023511.2-201ENST00000618803 211 ntBASIC20.45■□□□□ 0.86
PTCRAQ6ISU1 CR769767.2-201ENST00000622735 460 ntBASIC20.45■□□□□ 0.86
PTCRAQ6ISU1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
PTCRAQ6ISU1 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTCRAQ6ISU1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
PTCRAQ6ISU1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTCRAQ6ISU1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTCRAQ6ISU1 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PTCRAQ6ISU1 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTCRAQ6ISU1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PTCRAQ6ISU1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.44■□□□□ 0.86
PTCRAQ6ISU1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTCRAQ6ISU1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTCRAQ6ISU1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PTCRAQ6ISU1 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PTCRAQ6ISU1 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTCRAQ6ISU1 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PTCRAQ6ISU1 AC004870.1-201ENST00000315132 882 ntBASIC20.44■□□□□ 0.86
PTCRAQ6ISU1 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTCRAQ6ISU1 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PTCRAQ6ISU1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.44■□□□□ 0.86
PTCRAQ6ISU1 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.44■□□□□ 0.86
PTCRAQ6ISU1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.44■□□□□ 0.86
PTCRAQ6ISU1 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PTCRAQ6ISU1 MIR3652-201ENST00000579335 131 ntBASIC20.44■□□□□ 0.86
PTCRAQ6ISU1 AC083849.1-201ENST00000615227 514 ntBASIC20.44■□□□□ 0.86
PTCRAQ6ISU1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTCRAQ6ISU1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PTCRAQ6ISU1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTCRAQ6ISU1 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.44■□□□□ 0.86
PTCRAQ6ISU1 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.44■□□□□ 0.86
PTCRAQ6ISU1 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PTCRAQ6ISU1 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTCRAQ6ISU1 KRT8P10-201ENST00000450021 1447 ntBASIC20.44■□□□□ 0.86
PTCRAQ6ISU1 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTCRAQ6ISU1 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTCRAQ6ISU1 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
PTCRAQ6ISU1 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PTCRAQ6ISU1 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTCRAQ6ISU1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.43■□□□□ 0.86
PTCRAQ6ISU1 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTCRAQ6ISU1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PTCRAQ6ISU1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.43■□□□□ 0.86
PTCRAQ6ISU1 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PTCRAQ6ISU1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.43■□□□□ 0.86
PTCRAQ6ISU1 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.43■□□□□ 0.86
PTCRAQ6ISU1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTCRAQ6ISU1 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.43■□□□□ 0.86
PTCRAQ6ISU1 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.43■□□□□ 0.86
PTCRAQ6ISU1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.43■□□□□ 0.86
PTCRAQ6ISU1 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTCRAQ6ISU1 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.43■□□□□ 0.86
PTCRAQ6ISU1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.43■□□□□ 0.86
PTCRAQ6ISU1 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.43■□□□□ 0.86
PTCRAQ6ISU1 HLA-A-209ENST00000638375 975 ntBASIC20.43■□□□□ 0.86
PTCRAQ6ISU1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.43■□□□□ 0.86
PTCRAQ6ISU1 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PTCRAQ6ISU1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTCRAQ6ISU1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
PTCRAQ6ISU1 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PTCRAQ6ISU1 TFP1-202ENST00000475455 1573 ntBASIC20.42■□□□□ 0.86
PTCRAQ6ISU1 AC116351.2-201ENST00000606540 1585 ntBASIC20.42■□□□□ 0.86
PTCRAQ6ISU1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.42■□□□□ 0.86
PTCRAQ6ISU1 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTCRAQ6ISU1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTCRAQ6ISU1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTCRAQ6ISU1 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTCRAQ6ISU1 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTCRAQ6ISU1 AP000593.1-201ENST00000393668 712 ntBASIC20.42■□□□□ 0.86
PTCRAQ6ISU1 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.42■□□□□ 0.86
PTCRAQ6ISU1 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.42■□□□□ 0.86
PTCRAQ6ISU1 AC111152.3-201ENST00000569699 673 ntBASIC20.42■□□□□ 0.86
PTCRAQ6ISU1 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.42■□□□□ 0.86
PTCRAQ6ISU1 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.42■□□□□ 0.86
PTCRAQ6ISU1 AC092119.3-201ENST00000612618 583 ntBASIC20.42■□□□□ 0.86
PTCRAQ6ISU1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.42■□□□□ 0.86
PTCRAQ6ISU1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTCRAQ6ISU1 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTCRAQ6ISU1 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PTCRAQ6ISU1 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTCRAQ6ISU1 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms