Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CCDC18Q5T9S5 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
CCDC18Q5T9S5 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC30.68■■■□□ 2.5
CCDC18Q5T9S5 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
CCDC18Q5T9S5 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CCDC18Q5T9S5 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC30.67■■■□□ 2.5
CCDC18Q5T9S5 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
CCDC18Q5T9S5 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CCDC18Q5T9S5 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
CCDC18Q5T9S5 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
CCDC18Q5T9S5 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CCDC18Q5T9S5 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC30.67■■■□□ 2.5
CCDC18Q5T9S5 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC30.67■■■□□ 2.5
CCDC18Q5T9S5 EGLN1P1-201ENST00000531623 762 ntBASIC30.67■■■□□ 2.5
CCDC18Q5T9S5 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC30.67■■■□□ 2.5
CCDC18Q5T9S5 AC010203.1-204ENST00000548782 407 ntBASIC30.67■■■□□ 2.5
CCDC18Q5T9S5 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CCDC18Q5T9S5 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CCDC18Q5T9S5 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
CCDC18Q5T9S5 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CCDC18Q5T9S5 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
CCDC18Q5T9S5 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC30.66■■■□□ 2.5
CCDC18Q5T9S5 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CCDC18Q5T9S5 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC30.66■■■□□ 2.5
CCDC18Q5T9S5 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC30.66■■■□□ 2.5
CCDC18Q5T9S5 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CCDC18Q5T9S5 Z85996.1-201ENST00000494644 937 ntBASIC30.66■■■□□ 2.5
CCDC18Q5T9S5 CLN6-221ENST00000637494 765 ntTSL 5 BASIC30.66■■■□□ 2.5
CCDC18Q5T9S5 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC30.66■■■□□ 2.5
CCDC18Q5T9S5 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC18Q5T9S5 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC18Q5T9S5 FAM87A-204ENST00000613235 858 ntBASIC30.65■■■□□ 2.5
CCDC18Q5T9S5 AC006011.2-201ENST00000621313 1158 ntBASIC30.65■■■□□ 2.5
CCDC18Q5T9S5 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC30.65■■■□□ 2.5
CCDC18Q5T9S5 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC18Q5T9S5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC30.65■■■□□ 2.5
CCDC18Q5T9S5 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC18Q5T9S5 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC30.65■■■□□ 2.5
CCDC18Q5T9S5 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC18Q5T9S5 AL137013.1-201ENST00000432946 1228 ntBASIC30.64■■■□□ 2.5
CCDC18Q5T9S5 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC30.64■■■□□ 2.5
CCDC18Q5T9S5 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC30.64■■■□□ 2.5
CCDC18Q5T9S5 LTBR-211ENST00000543190 785 ntTSL 3 BASIC30.64■■■□□ 2.5
CCDC18Q5T9S5 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
CCDC18Q5T9S5 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC30.64■■■□□ 2.5
CCDC18Q5T9S5 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CCDC18Q5T9S5 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
CCDC18Q5T9S5 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
CCDC18Q5T9S5 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.49
CCDC18Q5T9S5 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC30.64■■■□□ 2.49
CCDC18Q5T9S5 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC30.64■■■□□ 2.49
CCDC18Q5T9S5 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC30.64■■■□□ 2.49
CCDC18Q5T9S5 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC30.64■■■□□ 2.49
CCDC18Q5T9S5 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
CCDC18Q5T9S5 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
CCDC18Q5T9S5 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC18Q5T9S5 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC18Q5T9S5 AC097488.1-201ENST00000507834 756 ntBASIC30.63■■■□□ 2.49
CCDC18Q5T9S5 CFL2-205ENST00000555765 632 ntTSL 2 BASIC30.63■■■□□ 2.49
CCDC18Q5T9S5 AP000692.2-201ENST00000608391 879 ntBASIC30.63■■■□□ 2.49
CCDC18Q5T9S5 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC18Q5T9S5 SMG8-203ENST00000578922 2178 ntBASIC30.63■■■□□ 2.49
CCDC18Q5T9S5 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC18Q5T9S5 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC30.63■■■□□ 2.49
CCDC18Q5T9S5 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC18Q5T9S5 AP001271.2-201ENST00000624018 1556 ntBASIC30.63■■■□□ 2.49
CCDC18Q5T9S5 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC18Q5T9S5 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC18Q5T9S5 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC18Q5T9S5 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC18Q5T9S5 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC30.63■■■□□ 2.49
CCDC18Q5T9S5 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC30.63■■■□□ 2.49
CCDC18Q5T9S5 AC011298.2-201ENST00000617989 482 ntBASIC30.63■■■□□ 2.49
CCDC18Q5T9S5 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC18Q5T9S5 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CCDC18Q5T9S5 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CCDC18Q5T9S5 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
CCDC18Q5T9S5 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CCDC18Q5T9S5 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CCDC18Q5T9S5 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
CCDC18Q5T9S5 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CCDC18Q5T9S5 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC30.62■■■□□ 2.49
CCDC18Q5T9S5 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC30.62■■■□□ 2.49
CCDC18Q5T9S5 DUX4L26-201ENST00000489078 1255 ntBASIC30.62■■■□□ 2.49
CCDC18Q5T9S5 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC30.62■■■□□ 2.49
CCDC18Q5T9S5 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC30.62■■■□□ 2.49
CCDC18Q5T9S5 AL590326.2-201ENST00000625139 305 ntBASIC30.62■■■□□ 2.49
CCDC18Q5T9S5 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CCDC18Q5T9S5 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
CCDC18Q5T9S5 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CCDC18Q5T9S5 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
CCDC18Q5T9S5 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CCDC18Q5T9S5 KRT8P8-201ENST00000434750 1448 ntBASIC30.6■■■□□ 2.49
CCDC18Q5T9S5 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC30.6■■■□□ 2.49
CCDC18Q5T9S5 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC30.6■■■□□ 2.49
CCDC18Q5T9S5 AC004951.3-201ENST00000418645 1148 ntBASIC30.6■■■□□ 2.49
CCDC18Q5T9S5 RNF146-204ENST00000476956 884 ntTSL 2 BASIC30.6■■■□□ 2.49
CCDC18Q5T9S5 FDX2-206ENST00000492239 773 ntTSL 2 BASIC30.6■■■□□ 2.49
CCDC18Q5T9S5 GLRB-205ENST00000512619 728 ntTSL 3 BASIC30.6■■■□□ 2.49
CCDC18Q5T9S5 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC30.6■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms