Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00242Q5T6M2 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00242Q5T6M2 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
LINC00242Q5T6M2 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00242Q5T6M2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
LINC00242Q5T6M2 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00242Q5T6M2 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00242Q5T6M2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
LINC00242Q5T6M2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
LINC00242Q5T6M2 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00242Q5T6M2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
LINC00242Q5T6M2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC00242Q5T6M2 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00242Q5T6M2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00242Q5T6M2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00242Q5T6M2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00242Q5T6M2 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00242Q5T6M2 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
LINC00242Q5T6M2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC13.5□□□□□ -0.25
LINC00242Q5T6M2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC00242Q5T6M2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00242Q5T6M2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC13.5□□□□□ -0.25
LINC00242Q5T6M2 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00242Q5T6M2 TERF1P2-201ENST00000583350 1212 ntBASIC13.5□□□□□ -0.25
LINC00242Q5T6M2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
LINC00242Q5T6M2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
LINC00242Q5T6M2 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00242Q5T6M2 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00242Q5T6M2 AC020763.4-201ENST00000623414 4170 ntBASIC13.5□□□□□ -0.25
LINC00242Q5T6M2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00242Q5T6M2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00242Q5T6M2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00242Q5T6M2 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00242Q5T6M2 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00242Q5T6M2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC00242Q5T6M2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00242Q5T6M2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00242Q5T6M2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00242Q5T6M2 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00242Q5T6M2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00242Q5T6M2 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00242Q5T6M2 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00242Q5T6M2 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00242Q5T6M2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
LINC00242Q5T6M2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00242Q5T6M2 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
LINC00242Q5T6M2 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
LINC00242Q5T6M2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00242Q5T6M2 AL138781.2-201ENST00000617896 1843 ntBASIC13.49□□□□□ -0.25
LINC00242Q5T6M2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00242Q5T6M2 COX20-201ENST00000366528 568 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00242Q5T6M2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00242Q5T6M2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00242Q5T6M2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00242Q5T6M2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC13.49□□□□□ -0.25
LINC00242Q5T6M2 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
LINC00242Q5T6M2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC13.49□□□□□ -0.25
LINC00242Q5T6M2 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00242Q5T6M2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00242Q5T6M2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00242Q5T6M2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00242Q5T6M2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00242Q5T6M2 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC13.49□□□□□ -0.25
LINC00242Q5T6M2 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00242Q5T6M2 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00242Q5T6M2 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00242Q5T6M2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00242Q5T6M2 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00242Q5T6M2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00242Q5T6M2 CYP21A1P-202ENST00000354927 1481 ntBASIC13.48□□□□□ -0.25
LINC00242Q5T6M2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC13.48□□□□□ -0.25
LINC00242Q5T6M2 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00242Q5T6M2 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
LINC00242Q5T6M2 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00242Q5T6M2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00242Q5T6M2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00242Q5T6M2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00242Q5T6M2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC13.48□□□□□ -0.25
LINC00242Q5T6M2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00242Q5T6M2 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00242Q5T6M2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
LINC00242Q5T6M2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00242Q5T6M2 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
LINC00242Q5T6M2 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00242Q5T6M2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
LINC00242Q5T6M2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
LINC00242Q5T6M2 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC13.48□□□□□ -0.25
LINC00242Q5T6M2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
LINC00242Q5T6M2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC13.48□□□□□ -0.25
LINC00242Q5T6M2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00242Q5T6M2 AC142381.2-201ENST00000566120 298 ntBASIC13.48□□□□□ -0.25
LINC00242Q5T6M2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC13.48□□□□□ -0.25
LINC00242Q5T6M2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00242Q5T6M2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC13.48□□□□□ -0.25
LINC00242Q5T6M2 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00242Q5T6M2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00242Q5T6M2 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00242Q5T6M2 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC00242Q5T6M2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
LINC00242Q5T6M2 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms