Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATP6AP1LQ52LC2 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATP6AP1LQ52LC2 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
ATP6AP1LQ52LC2 AC120498.9-201ENST00000339021 3867 ntBASIC19.07■□□□□ 0.64
ATP6AP1LQ52LC2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6AP1LQ52LC2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6AP1LQ52LC2 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.07■□□□□ 0.64
ATP6AP1LQ52LC2 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6AP1LQ52LC2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6AP1LQ52LC2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
ATP6AP1LQ52LC2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6AP1LQ52LC2 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6AP1LQ52LC2 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6AP1LQ52LC2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6AP1LQ52LC2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6AP1LQ52LC2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6AP1LQ52LC2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
ATP6AP1LQ52LC2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.07■□□□□ 0.64
ATP6AP1LQ52LC2 CYP2T3P-201ENST00000601990 817 ntBASIC19.07■□□□□ 0.64
ATP6AP1LQ52LC2 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6AP1LQ52LC2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6AP1LQ52LC2 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6AP1LQ52LC2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.07■□□□□ 0.64
ATP6AP1LQ52LC2 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.07■□□□□ 0.64
ATP6AP1LQ52LC2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6AP1LQ52LC2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
ATP6AP1LQ52LC2 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ATP6AP1LQ52LC2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP6AP1LQ52LC2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP6AP1LQ52LC2 Z82202.1-201ENST00000623446 1880 ntBASIC19.06■□□□□ 0.64
ATP6AP1LQ52LC2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.06■□□□□ 0.64
ATP6AP1LQ52LC2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP6AP1LQ52LC2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.06■□□□□ 0.64
ATP6AP1LQ52LC2 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.06■□□□□ 0.64
ATP6AP1LQ52LC2 CYP2T1P-201ENST00000432607 1285 ntBASIC19.06■□□□□ 0.64
ATP6AP1LQ52LC2 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP6AP1LQ52LC2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.06■□□□□ 0.64
ATP6AP1LQ52LC2 AC011767.1-201ENST00000617410 1153 ntBASIC19.06■□□□□ 0.64
ATP6AP1LQ52LC2 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
ATP6AP1LQ52LC2 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
ATP6AP1LQ52LC2 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.06■□□□□ 0.64
ATP6AP1LQ52LC2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.06■□□□□ 0.64
ATP6AP1LQ52LC2 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
ATP6AP1LQ52LC2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP6AP1LQ52LC2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
ATP6AP1LQ52LC2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP6AP1LQ52LC2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
ATP6AP1LQ52LC2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
ATP6AP1LQ52LC2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ATP6AP1LQ52LC2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
ATP6AP1LQ52LC2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP6AP1LQ52LC2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.05■□□□□ 0.64
ATP6AP1LQ52LC2 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.05■□□□□ 0.64
ATP6AP1LQ52LC2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.05■□□□□ 0.64
ATP6AP1LQ52LC2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.05■□□□□ 0.64
ATP6AP1LQ52LC2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP6AP1LQ52LC2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ATP6AP1LQ52LC2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP6AP1LQ52LC2 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP6AP1LQ52LC2 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.05■□□□□ 0.64
ATP6AP1LQ52LC2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.05■□□□□ 0.64
ATP6AP1LQ52LC2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.05■□□□□ 0.64
ATP6AP1LQ52LC2 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
ATP6AP1LQ52LC2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
ATP6AP1LQ52LC2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP6AP1LQ52LC2 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP6AP1LQ52LC2 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP6AP1LQ52LC2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.05■□□□□ 0.64
ATP6AP1LQ52LC2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP6AP1LQ52LC2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ATP6AP1LQ52LC2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ATP6AP1LQ52LC2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
ATP6AP1LQ52LC2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.04■□□□□ 0.64
ATP6AP1LQ52LC2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP6AP1LQ52LC2 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP6AP1LQ52LC2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
ATP6AP1LQ52LC2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.04■□□□□ 0.64
ATP6AP1LQ52LC2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP6AP1LQ52LC2 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP6AP1LQ52LC2 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP6AP1LQ52LC2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
ATP6AP1LQ52LC2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP6AP1LQ52LC2 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP6AP1LQ52LC2 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP6AP1LQ52LC2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.04■□□□□ 0.64
ATP6AP1LQ52LC2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.04■□□□□ 0.64
ATP6AP1LQ52LC2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.04■□□□□ 0.64
ATP6AP1LQ52LC2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.04■□□□□ 0.64
ATP6AP1LQ52LC2 AL589743.5-201ENST00000616611 1050 ntBASIC19.04■□□□□ 0.64
ATP6AP1LQ52LC2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.04■□□□□ 0.64
ATP6AP1LQ52LC2 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP6AP1LQ52LC2 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.04■□□□□ 0.64
ATP6AP1LQ52LC2 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ATP6AP1LQ52LC2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
ATP6AP1LQ52LC2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.04■□□□□ 0.64
ATP6AP1LQ52LC2 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP6AP1LQ52LC2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP6AP1LQ52LC2 PHGDH-210ENST00000641115 1638 ntBASIC19.03■□□□□ 0.64
ATP6AP1LQ52LC2 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
ATP6AP1LQ52LC2 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms