Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC58Q4VC31 LINC02228-203ENST00000641970 1355 ntBASIC17.62■□□□□ 0.41
CCDC58Q4VC31 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC58Q4VC31 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CCDC58Q4VC31 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC58Q4VC31 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC58Q4VC31 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
CCDC58Q4VC31 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC58Q4VC31 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC58Q4VC31 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC58Q4VC31 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC58Q4VC31 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC58Q4VC31 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC58Q4VC31 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.62■□□□□ 0.41
CCDC58Q4VC31 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
CCDC58Q4VC31 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC58Q4VC31 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC58Q4VC31 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC58Q4VC31 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC58Q4VC31 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC58Q4VC31 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC58Q4VC31 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
CCDC58Q4VC31 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCDC58Q4VC31 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC58Q4VC31 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC58Q4VC31 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC58Q4VC31 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC58Q4VC31 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC58Q4VC31 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CCDC58Q4VC31 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC58Q4VC31 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC58Q4VC31 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC58Q4VC31 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC58Q4VC31 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC58Q4VC31 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC58Q4VC31 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC58Q4VC31 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
CCDC58Q4VC31 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
CCDC58Q4VC31 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CCDC58Q4VC31 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC58Q4VC31 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CCDC58Q4VC31 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC58Q4VC31 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC58Q4VC31 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC58Q4VC31 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CCDC58Q4VC31 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC58Q4VC31 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC58Q4VC31 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC58Q4VC31 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC58Q4VC31 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC58Q4VC31 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC58Q4VC31 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC58Q4VC31 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CCDC58Q4VC31 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CCDC58Q4VC31 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC58Q4VC31 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC58Q4VC31 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC58Q4VC31 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC58Q4VC31 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CCDC58Q4VC31 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC58Q4VC31 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC58Q4VC31 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CCDC58Q4VC31 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC58Q4VC31 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CCDC58Q4VC31 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC58Q4VC31 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CCDC58Q4VC31 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC58Q4VC31 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC58Q4VC31 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC58Q4VC31 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.58■□□□□ 0.41
CCDC58Q4VC31 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.58■□□□□ 0.41
CCDC58Q4VC31 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC58Q4VC31 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC58Q4VC31 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC58Q4VC31 AL049812.1-201ENST00000432563 2267 ntBASIC17.58■□□□□ 0.4
CCDC58Q4VC31 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC58Q4VC31 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC58Q4VC31 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC58Q4VC31 AL356652.1-201ENST00000615962 565 ntBASIC17.58■□□□□ 0.4
CCDC58Q4VC31 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC58Q4VC31 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC58Q4VC31 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC58Q4VC31 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC58Q4VC31 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC58Q4VC31 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC58Q4VC31 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CCDC58Q4VC31 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC58Q4VC31 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC58Q4VC31 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CCDC58Q4VC31 AC087633.2-202ENST00000565166 1439 ntBASIC17.57■□□□□ 0.4
CCDC58Q4VC31 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC58Q4VC31 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC58Q4VC31 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC58Q4VC31 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC58Q4VC31 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CCDC58Q4VC31 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC58Q4VC31 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC58Q4VC31 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC58Q4VC31 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC58Q4VC31 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms