Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
CDK3Q00526 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.48■□□□□ 0.71
CDK3Q00526 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDK3Q00526 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDK3Q00526 AL691432.2-201ENST00000607222 2038 ntBASIC19.47■□□□□ 0.71
CDK3Q00526 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.47■□□□□ 0.71
CDK3Q00526 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CDK3Q00526 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDK3Q00526 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.47■□□□□ 0.71
CDK3Q00526 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.47■□□□□ 0.71
CDK3Q00526 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.47■□□□□ 0.71
CDK3Q00526 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDK3Q00526 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDK3Q00526 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
CDK3Q00526 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CDK3Q00526 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.47■□□□□ 0.71
CDK3Q00526 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDK3Q00526 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.47■□□□□ 0.71
CDK3Q00526 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDK3Q00526 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.47■□□□□ 0.71
CDK3Q00526 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
CDK3Q00526 AP001271.2-201ENST00000624018 1556 ntBASIC19.47■□□□□ 0.71
CDK3Q00526 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDK3Q00526 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.47■□□□□ 0.71
CDK3Q00526 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDK3Q00526 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.47■□□□□ 0.71
CDK3Q00526 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.47■□□□□ 0.71
CDK3Q00526 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDK3Q00526 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDK3Q00526 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDK3Q00526 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.47■□□□□ 0.71
CDK3Q00526 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.46■□□□□ 0.71
CDK3Q00526 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CDK3Q00526 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDK3Q00526 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDK3Q00526 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CDK3Q00526 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDK3Q00526 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.46■□□□□ 0.71
CDK3Q00526 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.46■□□□□ 0.71
CDK3Q00526 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.46■□□□□ 0.71
CDK3Q00526 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.46■□□□□ 0.71
CDK3Q00526 AC099778.1-201ENST00000568593 1911 ntBASIC19.46■□□□□ 0.71
CDK3Q00526 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDK3Q00526 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDK3Q00526 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDK3Q00526 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.46■□□□□ 0.71
CDK3Q00526 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.46■□□□□ 0.71
CDK3Q00526 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CDK3Q00526 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.46■□□□□ 0.71
CDK3Q00526 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDK3Q00526 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDK3Q00526 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CDK3Q00526 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDK3Q00526 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDK3Q00526 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDK3Q00526 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.45■□□□□ 0.7
CDK3Q00526 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDK3Q00526 TSPY7P-201ENST00000431358 1114 ntBASIC19.45■□□□□ 0.7
CDK3Q00526 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.45■□□□□ 0.7
CDK3Q00526 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDK3Q00526 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.45■□□□□ 0.7
CDK3Q00526 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDK3Q00526 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDK3Q00526 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDK3Q00526 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CDK3Q00526 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDK3Q00526 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDK3Q00526 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDK3Q00526 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.45■□□□□ 0.7
CDK3Q00526 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CDK3Q00526 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDK3Q00526 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDK3Q00526 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDK3Q00526 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.44■□□□□ 0.7
CDK3Q00526 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDK3Q00526 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.44■□□□□ 0.7
CDK3Q00526 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDK3Q00526 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CDK3Q00526 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDK3Q00526 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.44■□□□□ 0.7
CDK3Q00526 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.44■□□□□ 0.7
CDK3Q00526 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDK3Q00526 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.44■□□□□ 0.7
CDK3Q00526 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDK3Q00526 KRT18P16-201ENST00000510337 1294 ntBASIC19.44■□□□□ 0.7
CDK3Q00526 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.44■□□□□ 0.7
CDK3Q00526 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.44■□□□□ 0.7
CDK3Q00526 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.44■□□□□ 0.7
CDK3Q00526 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDK3Q00526 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.44■□□□□ 0.7
CDK3Q00526 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CDK3Q00526 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDK3Q00526 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDK3Q00526 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.44■□□□□ 0.7
CDK3Q00526 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CDK3Q00526 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.44■□□□□ 0.7
CDK3Q00526 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.44■□□□□ 0.7
CDK3Q00526 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDK3Q00526 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDK3Q00526 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms