Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AC083880.1-201ENST00000608266 535 ntBASIC17.28■□□□□ 0.36
HIST1H3AP68431 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
HIST1H3AP68431 AC018553.1-201ENST00000616682 1458 ntBASIC17.28■□□□□ 0.36
HIST1H3AP68431 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIST1H3AP68431 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.28■□□□□ 0.36
HIST1H3AP68431 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIST1H3AP68431 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIST1H3AP68431 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.28■□□□□ 0.36
HIST1H3AP68431 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HIST1H3AP68431 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.28■□□□□ 0.36
HIST1H3AP68431 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIST1H3AP68431 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HIST1H3AP68431 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HIST1H3AP68431 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HIST1H3AP68431 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HIST1H3AP68431 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
HIST1H3AP68431 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.27■□□□□ 0.36
HIST1H3AP68431 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.27■□□□□ 0.36
HIST1H3AP68431 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
HIST1H3AP68431 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
HIST1H3AP68431 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.27■□□□□ 0.36
HIST1H3AP68431 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HIST1H3AP68431 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HIST1H3AP68431 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.27■□□□□ 0.36
HIST1H3AP68431 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HIST1H3AP68431 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.27■□□□□ 0.36
HIST1H3AP68431 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.27■□□□□ 0.36
HIST1H3AP68431 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.27■□□□□ 0.36
HIST1H3AP68431 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HIST1H3AP68431 AC133041.1-202ENST00000642053 222 ntBASIC17.27■□□□□ 0.36
HIST1H3AP68431 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HIST1H3AP68431 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.27■□□□□ 0.36
HIST1H3AP68431 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.27■□□□□ 0.36
HIST1H3AP68431 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HIST1H3AP68431 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HIST1H3AP68431 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
HIST1H3AP68431 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
HIST1H3AP68431 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HIST1H3AP68431 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.27■□□□□ 0.35
HIST1H3AP68431 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HIST1H3AP68431 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
HIST1H3AP68431 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HIST1H3AP68431 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
HIST1H3AP68431 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
HIST1H3AP68431 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
HIST1H3AP68431 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HIST1H3AP68431 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H3AP68431 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.26■□□□□ 0.35
HIST1H3AP68431 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HIST1H3AP68431 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H3AP68431 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H3AP68431 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.26■□□□□ 0.35
HIST1H3AP68431 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.26■□□□□ 0.35
HIST1H3AP68431 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H3AP68431 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.26■□□□□ 0.35
HIST1H3AP68431 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.26■□□□□ 0.35
HIST1H3AP68431 AC069152.1-201ENST00000438030 544 ntBASIC17.26■□□□□ 0.35
HIST1H3AP68431 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.26■□□□□ 0.35
HIST1H3AP68431 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.26■□□□□ 0.35
HIST1H3AP68431 AC060766.5-201ENST00000590539 871 ntBASIC17.26■□□□□ 0.35
HIST1H3AP68431 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H3AP68431 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.26■□□□□ 0.35
HIST1H3AP68431 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.26■□□□□ 0.35
HIST1H3AP68431 TFP1-202ENST00000475455 1573 ntBASIC17.26■□□□□ 0.35
HIST1H3AP68431 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.26■□□□□ 0.35
HIST1H3AP68431 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
HIST1H3AP68431 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H3AP68431 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H3AP68431 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H3AP68431 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.26■□□□□ 0.35
HIST1H3AP68431 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H3AP68431 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.26■□□□□ 0.35
HIST1H3AP68431 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.26■□□□□ 0.35
HIST1H3AP68431 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H3AP68431 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H3AP68431 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H3AP68431 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
HIST1H3AP68431 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H3AP68431 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H3AP68431 AC092368.3-202ENST00000574180 1591 ntBASIC17.25■□□□□ 0.35
HIST1H3AP68431 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H3AP68431 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H3AP68431 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H3AP68431 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.25■□□□□ 0.35
HIST1H3AP68431 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H3AP68431 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
HIST1H3AP68431 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.25■□□□□ 0.35
HIST1H3AP68431 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HIST1H3AP68431 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.25■□□□□ 0.35
HIST1H3AP68431 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.25■□□□□ 0.35
HIST1H3AP68431 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H3AP68431 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
HIST1H3AP68431 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.25■□□□□ 0.35
HIST1H3AP68431 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H3AP68431 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HIST1H3AP68431 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HIST1H3AP68431 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.24■□□□□ 0.35
HIST1H3AP68431 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.24■□□□□ 0.35
HIST1H3AP68431 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HIST1H3AP68431 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms