Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 AC116351.2-201ENST00000606540 1585 ntBASIC20.8■□□□□ 0.92
USP46P62068 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.8■□□□□ 0.92
USP46P62068 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.79■□□□□ 0.92
USP46P62068 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP46P62068 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
USP46P62068 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP46P62068 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
USP46P62068 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.79■□□□□ 0.92
USP46P62068 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.79■□□□□ 0.92
USP46P62068 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.79■□□□□ 0.92
USP46P62068 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.79■□□□□ 0.92
USP46P62068 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.79■□□□□ 0.92
USP46P62068 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.79■□□□□ 0.92
USP46P62068 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP46P62068 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.79■□□□□ 0.92
USP46P62068 AC018553.1-201ENST00000616682 1458 ntBASIC20.79■□□□□ 0.92
USP46P62068 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
USP46P62068 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.79■□□□□ 0.92
USP46P62068 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP46P62068 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.78■□□□□ 0.92
USP46P62068 HTR7P1-201ENST00000538670 1336 ntBASIC20.78■□□□□ 0.92
USP46P62068 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP46P62068 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
USP46P62068 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.78■□□□□ 0.92
USP46P62068 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP46P62068 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP46P62068 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP46P62068 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP46P62068 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.78■□□□□ 0.92
USP46P62068 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP46P62068 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP46P62068 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.78■□□□□ 0.92
USP46P62068 BX119927.1-201ENST00000636596 1552 ntBASIC20.78■□□□□ 0.92
USP46P62068 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP46P62068 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
USP46P62068 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
USP46P62068 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP46P62068 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
USP46P62068 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP46P62068 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
USP46P62068 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.78■□□□□ 0.92
USP46P62068 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.78■□□□□ 0.92
USP46P62068 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.78■□□□□ 0.92
USP46P62068 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP46P62068 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP46P62068 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP46P62068 AL135905.2-201ENST00000584934 1404 ntBASIC20.78■□□□□ 0.92
USP46P62068 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP46P62068 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
USP46P62068 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP46P62068 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.77■□□□□ 0.92
USP46P62068 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP46P62068 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.77■□□□□ 0.92
USP46P62068 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP46P62068 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP46P62068 TFP1-202ENST00000475455 1573 ntBASIC20.77■□□□□ 0.92
USP46P62068 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP46P62068 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
USP46P62068 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.77■□□□□ 0.92
USP46P62068 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.77■□□□□ 0.92
USP46P62068 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP46P62068 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.77■□□□□ 0.92
USP46P62068 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP46P62068 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.77■□□□□ 0.92
USP46P62068 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
USP46P62068 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.77■□□□□ 0.92
USP46P62068 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP46P62068 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
USP46P62068 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP46P62068 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
USP46P62068 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
USP46P62068 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
USP46P62068 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
USP46P62068 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.76■□□□□ 0.91
USP46P62068 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
USP46P62068 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP46P62068 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP46P62068 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP46P62068 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP46P62068 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP46P62068 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.76■□□□□ 0.91
USP46P62068 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP46P62068 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.76■□□□□ 0.91
USP46P62068 AF186192.3-201ENST00000583427 947 ntBASIC20.76■□□□□ 0.91
USP46P62068 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
USP46P62068 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.76■□□□□ 0.91
USP46P62068 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.76■□□□□ 0.91
USP46P62068 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.76■□□□□ 0.91
USP46P62068 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP46P62068 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
USP46P62068 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
USP46P62068 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP46P62068 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP46P62068 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP46P62068 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP46P62068 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
USP46P62068 PHGDH-210ENST00000641115 1638 ntBASIC20.75■□□□□ 0.91
USP46P62068 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP46P62068 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.75■□□□□ 0.91
USP46P62068 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms