Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMIM11AP58511 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.19■□□□□ 0.5
SMIM11AP58511 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMIM11AP58511 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SMIM11AP58511 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SMIM11AP58511 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SMIM11AP58511 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMIM11AP58511 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMIM11AP58511 MFSD11-216ENST00000590393 1141 ntBASIC18.19■□□□□ 0.5
SMIM11AP58511 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMIM11AP58511 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMIM11AP58511 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SMIM11AP58511 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.19■□□□□ 0.5
SMIM11AP58511 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMIM11AP58511 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SMIM11AP58511 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMIM11AP58511 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMIM11AP58511 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMIM11AP58511 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMIM11AP58511 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM11AP58511 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM11AP58511 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM11AP58511 AC090340.1-201ENST00000620778 4980 ntBASIC18.18■□□□□ 0.5
SMIM11AP58511 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM11AP58511 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM11AP58511 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM11AP58511 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM11AP58511 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM11AP58511 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM11AP58511 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM11AP58511 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM11AP58511 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM11AP58511 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SMIM11AP58511 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM11AP58511 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM11AP58511 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.18■□□□□ 0.5
SMIM11AP58511 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.18■□□□□ 0.5
SMIM11AP58511 AC016405.3-201ENST00000607710 860 ntBASIC18.18■□□□□ 0.5
SMIM11AP58511 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SMIM11AP58511 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM11AP58511 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SMIM11AP58511 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM11AP58511 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SMIM11AP58511 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM11AP58511 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.18■□□□□ 0.5
SMIM11AP58511 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.18■□□□□ 0.5
SMIM11AP58511 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM11AP58511 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.18■□□□□ 0.5
SMIM11AP58511 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.18■□□□□ 0.5
SMIM11AP58511 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM11AP58511 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM11AP58511 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM11AP58511 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM11AP58511 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM11AP58511 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM11AP58511 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.17■□□□□ 0.5
SMIM11AP58511 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM11AP58511 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM11AP58511 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.17■□□□□ 0.5
SMIM11AP58511 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SMIM11AP58511 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.17■□□□□ 0.5
SMIM11AP58511 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SMIM11AP58511 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM11AP58511 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM11AP58511 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM11AP58511 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM11AP58511 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM11AP58511 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM11AP58511 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM11AP58511 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM11AP58511 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SMIM11AP58511 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM11AP58511 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM11AP58511 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM11AP58511 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM11AP58511 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.16■□□□□ 0.5
SMIM11AP58511 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM11AP58511 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.16■□□□□ 0.5
SMIM11AP58511 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.16■□□□□ 0.5
SMIM11AP58511 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM11AP58511 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM11AP58511 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM11AP58511 KRT18P68-201ENST00000392293 1000 ntBASIC18.16■□□□□ 0.5
SMIM11AP58511 RARRES2P4-201ENST00000514074 484 ntBASIC18.16■□□□□ 0.5
SMIM11AP58511 KRT18P61-201ENST00000585825 1298 ntBASIC18.16■□□□□ 0.5
SMIM11AP58511 AC105020.6-201ENST00000621523 1217 ntBASIC18.16■□□□□ 0.5
SMIM11AP58511 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SMIM11AP58511 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM11AP58511 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM11AP58511 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM11AP58511 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM11AP58511 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM11AP58511 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM11AP58511 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM11AP58511 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM11AP58511 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.15■□□□□ 0.5
SMIM11AP58511 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM11AP58511 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM11AP58511 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM11AP58511 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms