Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH8P55286 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.12■□□□□ 0.97
CDH8P55286 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH8P55286 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.12■□□□□ 0.97
CDH8P55286 AL158047.1-201ENST00000445918 881 ntBASIC21.12■□□□□ 0.97
CDH8P55286 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
CDH8P55286 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.12■□□□□ 0.97
CDH8P55286 AC142381.4-202ENST00000563973 229 ntBASIC21.12■□□□□ 0.97
CDH8P55286 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.12■□□□□ 0.97
CDH8P55286 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CDH8P55286 AL359736.2-201ENST00000621992 437 ntBASIC21.12■□□□□ 0.97
CDH8P55286 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.12■□□□□ 0.97
CDH8P55286 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH8P55286 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDH8P55286 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.12■□□□□ 0.97
CDH8P55286 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.12■□□□□ 0.97
CDH8P55286 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.11■□□□□ 0.97
CDH8P55286 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDH8P55286 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.11■□□□□ 0.97
CDH8P55286 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CDH8P55286 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH8P55286 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH8P55286 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.11■□□□□ 0.97
CDH8P55286 KRASP1-201ENST00000407852 552 ntBASIC21.11■□□□□ 0.97
CDH8P55286 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.11■□□□□ 0.97
CDH8P55286 GCSHP5-201ENST00000443090 522 ntBASIC21.11■□□□□ 0.97
CDH8P55286 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.11■□□□□ 0.97
CDH8P55286 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.11■□□□□ 0.97
CDH8P55286 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.11■□□□□ 0.97
CDH8P55286 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.11■□□□□ 0.97
CDH8P55286 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDH8P55286 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CDH8P55286 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.11■□□□□ 0.97
CDH8P55286 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.11■□□□□ 0.97
CDH8P55286 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDH8P55286 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CDH8P55286 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH8P55286 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH8P55286 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CDH8P55286 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH8P55286 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.1■□□□□ 0.97
CDH8P55286 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH8P55286 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH8P55286 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH8P55286 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH8P55286 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH8P55286 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDH8P55286 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CDH8P55286 PRKY-204ENST00000533551 1019 ntBASIC21.1■□□□□ 0.97
CDH8P55286 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.1■□□□□ 0.97
CDH8P55286 AC124016.1-201ENST00000609552 612 ntBASIC21.1■□□□□ 0.97
CDH8P55286 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CDH8P55286 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH8P55286 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH8P55286 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CDH8P55286 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.1■□□□□ 0.97
CDH8P55286 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH8P55286 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
CDH8P55286 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.09■□□□□ 0.97
CDH8P55286 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH8P55286 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH8P55286 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH8P55286 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH8P55286 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.09■□□□□ 0.97
CDH8P55286 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDH8P55286 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.09■□□□□ 0.97
CDH8P55286 AC239809.2-201ENST00000415381 517 ntBASIC21.09■□□□□ 0.97
CDH8P55286 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CDH8P55286 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDH8P55286 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.09■□□□□ 0.97
CDH8P55286 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.09■□□□□ 0.97
CDH8P55286 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDH8P55286 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH8P55286 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH8P55286 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.09■□□□□ 0.97
CDH8P55286 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CDH8P55286 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDH8P55286 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.09■□□□□ 0.97
CDH8P55286 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CDH8P55286 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDH8P55286 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDH8P55286 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDH8P55286 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.08■□□□□ 0.97
CDH8P55286 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDH8P55286 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDH8P55286 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDH8P55286 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDH8P55286 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDH8P55286 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDH8P55286 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDH8P55286 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDH8P55286 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
CDH8P55286 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.08■□□□□ 0.97
CDH8P55286 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.08■□□□□ 0.97
CDH8P55286 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.08■□□□□ 0.97
CDH8P55286 AP001271.2-201ENST00000624018 1556 ntBASIC21.08■□□□□ 0.97
CDH8P55286 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CDH8P55286 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDH8P55286 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CDH8P55286 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms