Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC25A1P53007 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC25A1P53007 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC25A1P53007 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC25A1P53007 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.55■□□□□ 0.4
SLC25A1P53007 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC25A1P53007 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SLC25A1P53007 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC25A1P53007 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SLC25A1P53007 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
SLC25A1P53007 AC005181.1-201ENST00000604782 1256 ntBASIC17.55■□□□□ 0.4
SLC25A1P53007 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC25A1P53007 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC25A1P53007 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
SLC25A1P53007 TNXA-203ENST00000507684 2038 ntBASIC17.55■□□□□ 0.4
SLC25A1P53007 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC25A1P53007 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC25A1P53007 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC25A1P53007 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.55■□□□□ 0.4
SLC25A1P53007 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.55■□□□□ 0.4
SLC25A1P53007 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC25A1P53007 AL032819.2-201ENST00000624543 2162 ntBASIC17.55■□□□□ 0.4
SLC25A1P53007 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC25A1P53007 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SLC25A1P53007 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SLC25A1P53007 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC25A1P53007 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC25A1P53007 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC25A1P53007 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC25A1P53007 AL162430.1-201ENST00000480705 870 ntBASIC17.54■□□□□ 0.4
SLC25A1P53007 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.54■□□□□ 0.4
SLC25A1P53007 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SLC25A1P53007 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
SLC25A1P53007 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC25A1P53007 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC25A1P53007 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC25A1P53007 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC25A1P53007 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC25A1P53007 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC25A1P53007 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC25A1P53007 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC25A1P53007 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.54■□□□□ 0.4
SLC25A1P53007 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC25A1P53007 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC25A1P53007 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.54■□□□□ 0.4
SLC25A1P53007 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC25A1P53007 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC25A1P53007 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC25A1P53007 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
SLC25A1P53007 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC25A1P53007 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC25A1P53007 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC25A1P53007 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC25A1P53007 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC25A1P53007 LSM12P1-201ENST00000411836 588 ntBASIC17.53■□□□□ 0.4
SLC25A1P53007 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.53■□□□□ 0.4
SLC25A1P53007 AC133552.2-202ENST00000575694 574 ntBASIC17.53■□□□□ 0.4
SLC25A1P53007 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SLC25A1P53007 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC25A1P53007 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC25A1P53007 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SLC25A1P53007 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC25A1P53007 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC25A1P53007 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC25A1P53007 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC25A1P53007 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC25A1P53007 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SLC25A1P53007 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC25A1P53007 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC25A1P53007 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC25A1P53007 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.52■□□□□ 0.4
SLC25A1P53007 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.52■□□□□ 0.4
SLC25A1P53007 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.52■□□□□ 0.4
SLC25A1P53007 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC25A1P53007 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SLC25A1P53007 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC25A1P53007 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SLC25A1P53007 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC25A1P53007 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.52■□□□□ 0.4
SLC25A1P53007 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.52■□□□□ 0.4
SLC25A1P53007 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.52■□□□□ 0.4
SLC25A1P53007 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.52■□□□□ 0.4
SLC25A1P53007 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.52■□□□□ 0.4
SLC25A1P53007 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC25A1P53007 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.52■□□□□ 0.4
SLC25A1P53007 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC25A1P53007 MIR5787-201ENST00000611784 55 ntBASIC17.52■□□□□ 0.4
SLC25A1P53007 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.52■□□□□ 0.4
SLC25A1P53007 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.52■□□□□ 0.4
SLC25A1P53007 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SLC25A1P53007 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
SLC25A1P53007 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC25A1P53007 AC116351.2-201ENST00000606540 1585 ntBASIC17.52■□□□□ 0.39
SLC25A1P53007 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC25A1P53007 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC25A1P53007 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC25A1P53007 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.52■□□□□ 0.39
SLC25A1P53007 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SLC25A1P53007 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SLC25A1P53007 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms