Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
HMGA2P52926 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGA2P52926 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.04■□□□□ 0.48
HMGA2P52926 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
HMGA2P52926 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGA2P52926 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
HMGA2P52926 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.04■□□□□ 0.48
HMGA2P52926 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGA2P52926 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGA2P52926 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
HMGA2P52926 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGA2P52926 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGA2P52926 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HMGA2P52926 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.03■□□□□ 0.48
HMGA2P52926 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGA2P52926 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.03■□□□□ 0.48
HMGA2P52926 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.03■□□□□ 0.48
HMGA2P52926 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.03■□□□□ 0.48
HMGA2P52926 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
HMGA2P52926 NTF6G-201ENST00000591094 616 ntBASIC18.03■□□□□ 0.48
HMGA2P52926 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HMGA2P52926 AC068338.2-201ENST00000563278 1430 ntBASIC18.03■□□□□ 0.48
HMGA2P52926 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.03■□□□□ 0.48
HMGA2P52926 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.03■□□□□ 0.48
HMGA2P52926 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGA2P52926 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.03■□□□□ 0.48
HMGA2P52926 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGA2P52926 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGA2P52926 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HMGA2P52926 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HMGA2P52926 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.02■□□□□ 0.48
HMGA2P52926 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HMGA2P52926 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
HMGA2P52926 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.02■□□□□ 0.48
HMGA2P52926 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HMGA2P52926 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
HMGA2P52926 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HMGA2P52926 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HMGA2P52926 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.02■□□□□ 0.47
HMGA2P52926 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
HMGA2P52926 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
HMGA2P52926 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HMGA2P52926 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
HMGA2P52926 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
HMGA2P52926 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGA2P52926 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
HMGA2P52926 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.01■□□□□ 0.47
HMGA2P52926 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.01■□□□□ 0.47
HMGA2P52926 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HMGA2P52926 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.01■□□□□ 0.47
HMGA2P52926 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGA2P52926 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGA2P52926 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HMGA2P52926 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
HMGA2P52926 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGA2P52926 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.01■□□□□ 0.47
HMGA2P52926 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.01■□□□□ 0.47
HMGA2P52926 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.01■□□□□ 0.47
HMGA2P52926 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.01■□□□□ 0.47
HMGA2P52926 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.01■□□□□ 0.47
HMGA2P52926 CYP2T3P-201ENST00000601990 817 ntBASIC18.01■□□□□ 0.47
HMGA2P52926 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
HMGA2P52926 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.01■□□□□ 0.47
HMGA2P52926 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
HMGA2P52926 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HMGA2P52926 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.01■□□□□ 0.47
HMGA2P52926 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.01■□□□□ 0.47
HMGA2P52926 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.01■□□□□ 0.47
HMGA2P52926 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGA2P52926 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HMGA2P52926 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.01■□□□□ 0.47
HMGA2P52926 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMGA2P52926 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
HMGA2P52926 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
HMGA2P52926 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMGA2P52926 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMGA2P52926 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18■□□□□ 0.47
HMGA2P52926 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18■□□□□ 0.47
HMGA2P52926 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18■□□□□ 0.47
HMGA2P52926 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMGA2P52926 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18■□□□□ 0.47
HMGA2P52926 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
HMGA2P52926 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
HMGA2P52926 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMGA2P52926 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18■□□□□ 0.47
HMGA2P52926 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMGA2P52926 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
HMGA2P52926 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18■□□□□ 0.47
HMGA2P52926 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
HMGA2P52926 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMGA2P52926 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18■□□□□ 0.47
HMGA2P52926 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18■□□□□ 0.47
HMGA2P52926 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMGA2P52926 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGA2P52926 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HMGA2P52926 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGA2P52926 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGA2P52926 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGA2P52926 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.99■□□□□ 0.47
HMGA2P52926 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms